Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 AC091305.1-201ENST00000479476 895 ntBASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB18PQ96TA0 AL024507.2-201ENST00000606070 2574 ntBASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 MIR572-201ENST00000384983 95 ntBASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB18PQ96TA0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PCDHB18PQ96TA0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 AC055733.4-201ENST00000638462 1354 ntBASIC22.58■■□□□ 1.21
PCDHB18PQ96TA0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHB18PQ96TA0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHB18PQ96TA0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHB18PQ96TA0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.57■■□□□ 1.2
PCDHB18PQ96TA0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB18PQ96TA0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PCDHB18PQ96TA0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PCDHB18PQ96TA0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHB18PQ96TA0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHB18PQ96TA0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
PCDHB18PQ96TA0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB18PQ96TA0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB18PQ96TA0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB18PQ96TA0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB18PQ96TA0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB18PQ96TA0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 AC009237.3-201ENST00000393279 1427 ntBASIC22.55■■□□□ 1.2
PCDHB18PQ96TA0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB18PQ96TA0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB18PQ96TA0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB18PQ96TA0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB18PQ96TA0 BX005040.4-201ENST00000637145 1518 ntBASIC22.54■■□□□ 1.2
PCDHB18PQ96TA0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB18PQ96TA0 AC005224.4-201ENST00000583262 1652 ntBASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms