Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RAB40CQ96S21 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB40CQ96S21 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB40CQ96S21 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.21■□□□□ 0.34
RAB40CQ96S21 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RAB40CQ96S21 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40CQ96S21 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40CQ96S21 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
RAB40CQ96S21 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.2■□□□□ 0.34
RAB40CQ96S21 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40CQ96S21 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40CQ96S21 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40CQ96S21 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.2■□□□□ 0.34
RAB40CQ96S21 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.2■□□□□ 0.34
RAB40CQ96S21 AL499627.2-201ENST00000606283 725 ntBASIC17.2■□□□□ 0.34
RAB40CQ96S21 AL031848.2-201ENST00000607670 837 ntBASIC17.2■□□□□ 0.34
RAB40CQ96S21 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40CQ96S21 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40CQ96S21 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB40CQ96S21 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RAB40CQ96S21 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RAB40CQ96S21 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40CQ96S21 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40CQ96S21 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB40CQ96S21 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RAB40CQ96S21 AL049796.1-201ENST00000565336 1766 ntBASIC17.2■□□□□ 0.34
RAB40CQ96S21 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RAB40CQ96S21 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40CQ96S21 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40CQ96S21 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40CQ96S21 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40CQ96S21 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40CQ96S21 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40CQ96S21 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB40CQ96S21 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40CQ96S21 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB40CQ96S21 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RAB40CQ96S21 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB40CQ96S21 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40CQ96S21 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40CQ96S21 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40CQ96S21 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB40CQ96S21 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RAB40CQ96S21 AL031602.1-201ENST00000633169 911 ntBASIC17.18■□□□□ 0.34
RAB40CQ96S21 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40CQ96S21 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40CQ96S21 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RAB40CQ96S21 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40CQ96S21 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB40CQ96S21 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RAB40CQ96S21 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB40CQ96S21 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40CQ96S21 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40CQ96S21 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40CQ96S21 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RAB40CQ96S21 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB40CQ96S21 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40CQ96S21 RARRES2P1-201ENST00000474487 481 ntBASIC17.17■□□□□ 0.34
RAB40CQ96S21 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40CQ96S21 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40CQ96S21 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RAB40CQ96S21 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40CQ96S21 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40CQ96S21 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
RAB40CQ96S21 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40CQ96S21 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB40CQ96S21 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB40CQ96S21 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RAB40CQ96S21 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.16■□□□□ 0.34
RAB40CQ96S21 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RAB40CQ96S21 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RAB40CQ96S21 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RAB40CQ96S21 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40CQ96S21 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms