Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ODF3Q96PU9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ODF3Q96PU9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
ODF3Q96PU9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
ODF3Q96PU9 AL121603.2-201ENST00000557373 2117 ntBASIC15.7■□□□□ 0.1
ODF3Q96PU9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ODF3Q96PU9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ODF3Q96PU9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ODF3Q96PU9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ODF3Q96PU9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.7■□□□□ 0.1
ODF3Q96PU9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ODF3Q96PU9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ODF3Q96PU9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ODF3Q96PU9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.7■□□□□ 0.1
ODF3Q96PU9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ODF3Q96PU9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.7■□□□□ 0.1
ODF3Q96PU9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.7■□□□□ 0.1
ODF3Q96PU9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ODF3Q96PU9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ODF3Q96PU9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.69■□□□□ 0.1
ODF3Q96PU9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ODF3Q96PU9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.69■□□□□ 0.1
ODF3Q96PU9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.69■□□□□ 0.1
ODF3Q96PU9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ODF3Q96PU9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.69■□□□□ 0.1
ODF3Q96PU9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
ODF3Q96PU9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.69■□□□□ 0.1
ODF3Q96PU9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ODF3Q96PU9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ODF3Q96PU9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ODF3Q96PU9 AL137060.1-201ENST00000618151 2648 ntBASIC15.68■□□□□ 0.1
ODF3Q96PU9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ODF3Q96PU9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ODF3Q96PU9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ODF3Q96PU9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ODF3Q96PU9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ODF3Q96PU9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 AC008406.3-201ENST00000620001 1374 ntBASIC15.68■□□□□ 0.1
ODF3Q96PU9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ODF3Q96PU9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ODF3Q96PU9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ODF3Q96PU9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ODF3Q96PU9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.68■□□□□ 0.1
ODF3Q96PU9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ODF3Q96PU9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ODF3Q96PU9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ODF3Q96PU9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.67■□□□□ 0.1
ODF3Q96PU9 EDA-201ENST00000338901 1233 ntBASIC15.67■□□□□ 0.1
ODF3Q96PU9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ODF3Q96PU9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ODF3Q96PU9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.67■□□□□ 0.1
ODF3Q96PU9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
ODF3Q96PU9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ODF3Q96PU9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ODF3Q96PU9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ODF3Q96PU9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.67■□□□□ 0.1
ODF3Q96PU9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.67■□□□□ 0.1
ODF3Q96PU9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ODF3Q96PU9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ODF3Q96PU9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ODF3Q96PU9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ODF3Q96PU9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ODF3Q96PU9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ODF3Q96PU9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.66■□□□□ 0.1
ODF3Q96PU9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ODF3Q96PU9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ODF3Q96PU9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ODF3Q96PU9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ODF3Q96PU9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.66■□□□□ 0.1
ODF3Q96PU9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ODF3Q96PU9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.66■□□□□ 0.1
ODF3Q96PU9 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.66■□□□□ 0.1
ODF3Q96PU9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.66■□□□□ 0.1
ODF3Q96PU9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ODF3Q96PU9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms