Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 AC231657.2-201ENST00000624556 255 ntBASIC17.29■□□□□ 0.36
ZNF48Q96MX3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF48Q96MX3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 AC242852.2-201ENST00000615738 1807 ntBASIC17.28■□□□□ 0.36
ZNF48Q96MX3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF48Q96MX3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF48Q96MX3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF48Q96MX3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF48Q96MX3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF48Q96MX3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ZNF48Q96MX3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF48Q96MX3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.27■□□□□ 0.36
ZNF48Q96MX3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF48Q96MX3 AC005181.1-201ENST00000604782 1256 ntBASIC17.27■□□□□ 0.36
ZNF48Q96MX3 AL121832.2-201ENST00000610979 668 ntBASIC17.27■□□□□ 0.36
ZNF48Q96MX3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF48Q96MX3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF48Q96MX3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
ZNF48Q96MX3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.27■□□□□ 0.35
ZNF48Q96MX3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF48Q96MX3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF48Q96MX3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
ZNF48Q96MX3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 AC007322.1-201ENST00000426983 750 ntBASIC17.26■□□□□ 0.35
ZNF48Q96MX3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 AC083906.2-201ENST00000511578 360 ntBASIC17.26■□□□□ 0.35
ZNF48Q96MX3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 LINC00526-201ENST00000581067 1875 ntBASIC17.26■□□□□ 0.35
ZNF48Q96MX3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF48Q96MX3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 OR7E47P-201ENST00000546390 1422 ntBASIC17.25■□□□□ 0.35
ZNF48Q96MX3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 ABHD17AP1-201ENST00000358206 933 ntBASIC17.25■□□□□ 0.35
ZNF48Q96MX3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 GUSBP6-202ENST00000438529 1198 ntBASIC17.25■□□□□ 0.35
ZNF48Q96MX3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF48Q96MX3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF48Q96MX3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms