Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CALR3Q96L12 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CALR3Q96L12 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CALR3Q96L12 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CALR3Q96L12 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CALR3Q96L12 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
CALR3Q96L12 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.45■■□□□ 1.18
CALR3Q96L12 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.45■■□□□ 1.18
CALR3Q96L12 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CALR3Q96L12 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CALR3Q96L12 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CALR3Q96L12 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.45■■□□□ 1.18
CALR3Q96L12 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.45■■□□□ 1.18
CALR3Q96L12 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CALR3Q96L12 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.44■■□□□ 1.18
CALR3Q96L12 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CALR3Q96L12 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CALR3Q96L12 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CALR3Q96L12 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CALR3Q96L12 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CALR3Q96L12 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CALR3Q96L12 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CALR3Q96L12 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CALR3Q96L12 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.44■■□□□ 1.18
CALR3Q96L12 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CALR3Q96L12 AC003102.1-202ENST00000563394 1796 ntBASIC22.44■■□□□ 1.18
CALR3Q96L12 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.44■■□□□ 1.18
CALR3Q96L12 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.44■■□□□ 1.18
CALR3Q96L12 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.44■■□□□ 1.18
CALR3Q96L12 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CALR3Q96L12 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CALR3Q96L12 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CALR3Q96L12 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CALR3Q96L12 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.43■■□□□ 1.18
CALR3Q96L12 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CALR3Q96L12 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CALR3Q96L12 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CALR3Q96L12 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.43■■□□□ 1.18
CALR3Q96L12 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CALR3Q96L12 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CALR3Q96L12 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.43■■□□□ 1.18
CALR3Q96L12 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CALR3Q96L12 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.43■■□□□ 1.18
CALR3Q96L12 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CALR3Q96L12 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CALR3Q96L12 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CALR3Q96L12 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.43■■□□□ 1.18
CALR3Q96L12 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CALR3Q96L12 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
CALR3Q96L12 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.42■■□□□ 1.18
CALR3Q96L12 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.42■■□□□ 1.18
CALR3Q96L12 LINC01521-201ENST00000504184 1943 ntBASIC22.42■■□□□ 1.18
CALR3Q96L12 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.42■■□□□ 1.18
CALR3Q96L12 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.42■■□□□ 1.18
CALR3Q96L12 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CALR3Q96L12 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.42■■□□□ 1.18
CALR3Q96L12 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 AL049796.1-201ENST00000565336 1766 ntBASIC22.42■■□□□ 1.18
CALR3Q96L12 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.42■■□□□ 1.18
CALR3Q96L12 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CALR3Q96L12 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.41■■□□□ 1.18
CALR3Q96L12 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.41■■□□□ 1.18
CALR3Q96L12 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CALR3Q96L12 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.41■■□□□ 1.18
CALR3Q96L12 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.41■■□□□ 1.18
CALR3Q96L12 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
CALR3Q96L12 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.41■■□□□ 1.18
CALR3Q96L12 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CALR3Q96L12 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.4■■□□□ 1.18
CALR3Q96L12 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CALR3Q96L12 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CALR3Q96L12 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.4■■□□□ 1.18
CALR3Q96L12 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CALR3Q96L12 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CALR3Q96L12 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CALR3Q96L12 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.4■■□□□ 1.18
CALR3Q96L12 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.4■■□□□ 1.18
CALR3Q96L12 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms