Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.75■■□□□ 1.07
RTP4Q96DX8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RTP4Q96DX8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTP4Q96DX8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.74■■□□□ 1.07
RTP4Q96DX8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
RTP4Q96DX8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RTP4Q96DX8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTP4Q96DX8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RTP4Q96DX8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.74■■□□□ 1.07
RTP4Q96DX8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTP4Q96DX8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTP4Q96DX8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RTP4Q96DX8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RTP4Q96DX8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTP4Q96DX8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RTP4Q96DX8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.73■■□□□ 1.07
RTP4Q96DX8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTP4Q96DX8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTP4Q96DX8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTP4Q96DX8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTP4Q96DX8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.73■■□□□ 1.07
RTP4Q96DX8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RTP4Q96DX8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
RTP4Q96DX8 MIR939-201ENST00000401314 82 ntBASIC21.73■■□□□ 1.07
RTP4Q96DX8 AC105265.2-201ENST00000467189 838 ntBASIC21.73■■□□□ 1.07
RTP4Q96DX8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.73■■□□□ 1.07
RTP4Q96DX8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RTP4Q96DX8 AC126544.1-201ENST00000580842 1059 ntBASIC21.73■■□□□ 1.07
RTP4Q96DX8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.73■■□□□ 1.07
RTP4Q96DX8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.73■■□□□ 1.07
RTP4Q96DX8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RTP4Q96DX8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.73■■□□□ 1.07
RTP4Q96DX8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RTP4Q96DX8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTP4Q96DX8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.72■■□□□ 1.07
RTP4Q96DX8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
RTP4Q96DX8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTP4Q96DX8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTP4Q96DX8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTP4Q96DX8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTP4Q96DX8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTP4Q96DX8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTP4Q96DX8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.72■■□□□ 1.07
RTP4Q96DX8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTP4Q96DX8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RTP4Q96DX8 AP001330.3-201ENST00000520123 633 ntBASIC21.72■■□□□ 1.07
RTP4Q96DX8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.72■■□□□ 1.07
RTP4Q96DX8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RTP4Q96DX8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.72■■□□□ 1.07
RTP4Q96DX8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RTP4Q96DX8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RTP4Q96DX8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTP4Q96DX8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTP4Q96DX8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTP4Q96DX8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTP4Q96DX8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RTP4Q96DX8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTP4Q96DX8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RTP4Q96DX8 AC027682.1-201ENST00000562846 899 ntBASIC21.71■■□□□ 1.07
RTP4Q96DX8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.71■■□□□ 1.07
RTP4Q96DX8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RTP4Q96DX8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.7■■□□□ 1.06
RTP4Q96DX8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTP4Q96DX8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RTP4Q96DX8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTP4Q96DX8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTP4Q96DX8 AC026271.2-201ENST00000428091 497 ntBASIC21.7■■□□□ 1.06
RTP4Q96DX8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.7■■□□□ 1.06
RTP4Q96DX8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTP4Q96DX8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTP4Q96DX8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.7■■□□□ 1.06
RTP4Q96DX8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTP4Q96DX8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTP4Q96DX8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTP4Q96DX8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTP4Q96DX8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTP4Q96DX8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTP4Q96DX8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.69■■□□□ 1.06
RTP4Q96DX8 AC099791.1-201ENST00000416440 715 ntBASIC21.69■■□□□ 1.06
RTP4Q96DX8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
RTP4Q96DX8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTP4Q96DX8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.69■■□□□ 1.06
RTP4Q96DX8 AC008764.7-201ENST00000593779 1081 ntBASIC21.69■■□□□ 1.06
RTP4Q96DX8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RTP4Q96DX8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.69■■□□□ 1.06
RTP4Q96DX8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.69■■□□□ 1.06
RTP4Q96DX8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTP4Q96DX8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTP4Q96DX8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RTP4Q96DX8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RTP4Q96DX8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTP4Q96DX8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTP4Q96DX8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.68■■□□□ 1.06
RTP4Q96DX8 AC091305.1-201ENST00000479476 895 ntBASIC21.68■■□□□ 1.06
RTP4Q96DX8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTP4Q96DX8 AC055733.4-201ENST00000638462 1354 ntBASIC21.68■■□□□ 1.06
RTP4Q96DX8 AC009237.3-201ENST00000393279 1427 ntBASIC21.68■■□□□ 1.06
RTP4Q96DX8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.68■■□□□ 1.06
RTP4Q96DX8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTP4Q96DX8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms