Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC58Q96CX6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC58Q96CX6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC58Q96CX6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC58Q96CX6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC58Q96CX6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC58Q96CX6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC58Q96CX6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC58Q96CX6 AC092667.1-201ENST00000434301 2586 ntBASIC20.2■□□□□ 0.82
LRRC58Q96CX6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC58Q96CX6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 MIR6724-1-201ENST00000616420 92 ntBASIC20.19■□□□□ 0.82
LRRC58Q96CX6 MIR6724-2-201ENST00000616483 92 ntBASIC20.19■□□□□ 0.82
LRRC58Q96CX6 MIR6724-4-201ENST00000617390 92 ntBASIC20.19■□□□□ 0.82
LRRC58Q96CX6 MIR6724-3-201ENST00000622482 92 ntBASIC20.19■□□□□ 0.82
LRRC58Q96CX6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC58Q96CX6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 AC087239.1-201ENST00000622671 572 ntBASIC20.18■□□□□ 0.82
LRRC58Q96CX6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC58Q96CX6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LRRC58Q96CX6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 AC003102.1-202ENST00000563394 1796 ntBASIC20.16■□□□□ 0.82
LRRC58Q96CX6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 OR2I1P-207ENST00000453522 948 ntBASIC20.16■□□□□ 0.82
LRRC58Q96CX6 AC010141.3-201ENST00000456659 717 ntBASIC20.16■□□□□ 0.82
LRRC58Q96CX6 AL121603.2-201ENST00000557373 2117 ntBASIC20.16■□□□□ 0.82
LRRC58Q96CX6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LRRC58Q96CX6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LRRC58Q96CX6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
LRRC58Q96CX6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LRRC58Q96CX6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC58Q96CX6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC58Q96CX6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.15■□□□□ 0.82
LRRC58Q96CX6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.15■□□□□ 0.82
LRRC58Q96CX6 AC099791.2-201ENST00000605725 427 ntBASIC20.15■□□□□ 0.82
LRRC58Q96CX6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC58Q96CX6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC58Q96CX6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC58Q96CX6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms