Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.39■□□□□ 0.85
VPS33AQ96AX1 MIR3181-201ENST00000578512 73 ntBASIC20.39■□□□□ 0.85
VPS33AQ96AX1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VPS33AQ96AX1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VPS33AQ96AX1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.39■□□□□ 0.85
VPS33AQ96AX1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VPS33AQ96AX1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VPS33AQ96AX1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 KRT16P3-201ENST00000439127 1283 ntBASIC20.38■□□□□ 0.85
VPS33AQ96AX1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.38■□□□□ 0.85
VPS33AQ96AX1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.37■□□□□ 0.85
VPS33AQ96AX1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VPS33AQ96AX1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VPS33AQ96AX1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 AC068587.7-201ENST00000641602 218 ntBASIC20.35■□□□□ 0.85
VPS33AQ96AX1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VPS33AQ96AX1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 OR2I1P-207ENST00000453522 948 ntBASIC20.34■□□□□ 0.85
VPS33AQ96AX1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.34■□□□□ 0.85
VPS33AQ96AX1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS33AQ96AX1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS33AQ96AX1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS33AQ96AX1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS33AQ96AX1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
VPS33AQ96AX1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS33AQ96AX1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
VPS33AQ96AX1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS33AQ96AX1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
VPS33AQ96AX1 AC010525.1-201ENST00000585559 441 ntBASIC20.33■□□□□ 0.85
VPS33AQ96AX1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.84
VPS33AQ96AX1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VPS33AQ96AX1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VPS33AQ96AX1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
VPS33AQ96AX1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS33AQ96AX1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms