Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.73■□□□□ 0.59
RFT1Q96AA3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RFT1Q96AA3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFT1Q96AA3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.73■□□□□ 0.59
RFT1Q96AA3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.73■□□□□ 0.59
RFT1Q96AA3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RFT1Q96AA3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.73■□□□□ 0.59
RFT1Q96AA3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RFT1Q96AA3 MIR6724-1-201ENST00000616420 92 ntBASIC18.73■□□□□ 0.59
RFT1Q96AA3 MIR6724-2-201ENST00000616483 92 ntBASIC18.73■□□□□ 0.59
RFT1Q96AA3 MIR6724-4-201ENST00000617390 92 ntBASIC18.73■□□□□ 0.59
RFT1Q96AA3 MIR6724-3-201ENST00000622482 92 ntBASIC18.73■□□□□ 0.59
RFT1Q96AA3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFT1Q96AA3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFT1Q96AA3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RFT1Q96AA3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RFT1Q96AA3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RFT1Q96AA3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.73■□□□□ 0.59
RFT1Q96AA3 LINC01006-201ENST00000333319 2292 ntBASIC18.72■□□□□ 0.59
RFT1Q96AA3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
RFT1Q96AA3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.72■□□□□ 0.59
RFT1Q96AA3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFT1Q96AA3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFT1Q96AA3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.72■□□□□ 0.59
RFT1Q96AA3 AL117332.1-201ENST00000622628 974 ntBASIC18.72■□□□□ 0.59
RFT1Q96AA3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.72■□□□□ 0.59
RFT1Q96AA3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.72■□□□□ 0.59
RFT1Q96AA3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFT1Q96AA3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFT1Q96AA3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFT1Q96AA3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFT1Q96AA3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.72■□□□□ 0.59
RFT1Q96AA3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFT1Q96AA3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFT1Q96AA3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFT1Q96AA3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFT1Q96AA3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFT1Q96AA3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.71■□□□□ 0.59
RFT1Q96AA3 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.71■□□□□ 0.59
RFT1Q96AA3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.71■□□□□ 0.59
RFT1Q96AA3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFT1Q96AA3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFT1Q96AA3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFT1Q96AA3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
RFT1Q96AA3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RFT1Q96AA3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFT1Q96AA3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFT1Q96AA3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFT1Q96AA3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.7■□□□□ 0.58
RFT1Q96AA3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFT1Q96AA3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
RFT1Q96AA3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFT1Q96AA3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFT1Q96AA3 KRT16P3-201ENST00000439127 1283 ntBASIC18.7■□□□□ 0.58
RFT1Q96AA3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.7■□□□□ 0.58
RFT1Q96AA3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RFT1Q96AA3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFT1Q96AA3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFT1Q96AA3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFT1Q96AA3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFT1Q96AA3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.69■□□□□ 0.58
RFT1Q96AA3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
RFT1Q96AA3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RFT1Q96AA3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.69■□□□□ 0.58
RFT1Q96AA3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
RFT1Q96AA3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.69■□□□□ 0.58
RFT1Q96AA3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RFT1Q96AA3 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.69■□□□□ 0.58
RFT1Q96AA3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.69■□□□□ 0.58
RFT1Q96AA3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.69■□□□□ 0.58
RFT1Q96AA3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RFT1Q96AA3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.69■□□□□ 0.58
RFT1Q96AA3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFT1Q96AA3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFT1Q96AA3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.68■□□□□ 0.58
RFT1Q96AA3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFT1Q96AA3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.68■□□□□ 0.58
RFT1Q96AA3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFT1Q96AA3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.68■□□□□ 0.58
RFT1Q96AA3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFT1Q96AA3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFT1Q96AA3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.68■□□□□ 0.58
RFT1Q96AA3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFT1Q96AA3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFT1Q96AA3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms