Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NCLNQ969V3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCLNQ969V3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NCLNQ969V3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.54■□□□□ 0.88
NCLNQ969V3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.53■□□□□ 0.88
NCLNQ969V3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
NCLNQ969V3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLNQ969V3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCLNQ969V3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLNQ969V3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.53■□□□□ 0.88
NCLNQ969V3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.53■□□□□ 0.88
NCLNQ969V3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.53■□□□□ 0.88
NCLNQ969V3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.53■□□□□ 0.88
NCLNQ969V3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCLNQ969V3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCLNQ969V3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLNQ969V3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.53■□□□□ 0.88
NCLNQ969V3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLNQ969V3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLNQ969V3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLNQ969V3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.53■□□□□ 0.88
NCLNQ969V3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLNQ969V3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.53■□□□□ 0.88
NCLNQ969V3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCLNQ969V3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.52■□□□□ 0.88
NCLNQ969V3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NCLNQ969V3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCLNQ969V3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NCLNQ969V3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCLNQ969V3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCLNQ969V3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NCLNQ969V3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.52■□□□□ 0.88
NCLNQ969V3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NCLNQ969V3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.52■□□□□ 0.88
NCLNQ969V3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCLNQ969V3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.52■□□□□ 0.88
NCLNQ969V3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCLNQ969V3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.52■□□□□ 0.87
NCLNQ969V3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NCLNQ969V3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.52■□□□□ 0.87
NCLNQ969V3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.52■□□□□ 0.87
NCLNQ969V3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NCLNQ969V3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLNQ969V3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLNQ969V3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NCLNQ969V3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLNQ969V3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NCLNQ969V3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLNQ969V3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLNQ969V3 ZNRF2P3-201ENST00000424200 374 ntBASIC20.51■□□□□ 0.87
NCLNQ969V3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCLNQ969V3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
NCLNQ969V3 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.51■□□□□ 0.87
NCLNQ969V3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCLNQ969V3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLNQ969V3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.5■□□□□ 0.87
NCLNQ969V3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLNQ969V3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLNQ969V3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.5■□□□□ 0.87
NCLNQ969V3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLNQ969V3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.5■□□□□ 0.87
NCLNQ969V3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.5■□□□□ 0.87
NCLNQ969V3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.5■□□□□ 0.87
NCLNQ969V3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.5■□□□□ 0.87
NCLNQ969V3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.5■□□□□ 0.87
NCLNQ969V3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
NCLNQ969V3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.5■□□□□ 0.87
NCLNQ969V3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
NCLNQ969V3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NCLNQ969V3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.49■□□□□ 0.87
NCLNQ969V3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.49■□□□□ 0.87
NCLNQ969V3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NCLNQ969V3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCLNQ969V3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLNQ969V3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.49■□□□□ 0.87
NCLNQ969V3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NCLNQ969V3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCLNQ969V3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCLNQ969V3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NCLNQ969V3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NCLNQ969V3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.48■□□□□ 0.87
NCLNQ969V3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCLNQ969V3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.48■□□□□ 0.87
NCLNQ969V3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.48■□□□□ 0.87
NCLNQ969V3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
NCLNQ969V3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NCLNQ969V3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLNQ969V3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.47■□□□□ 0.87
NCLNQ969V3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLNQ969V3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLNQ969V3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLNQ969V3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLNQ969V3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.47■□□□□ 0.87
NCLNQ969V3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NCLNQ969V3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLNQ969V3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NCLNQ969V3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLNQ969V3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLNQ969V3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NCLNQ969V3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms