Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
STAG1Q8WVM7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
STAG1Q8WVM7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.16■■□□□ 1.62
STAG1Q8WVM7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.16■■□□□ 1.62
STAG1Q8WVM7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.15■■□□□ 1.62
STAG1Q8WVM7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.14■■□□□ 1.62
STAG1Q8WVM7 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.14■■□□□ 1.62
STAG1Q8WVM7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
STAG1Q8WVM7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
STAG1Q8WVM7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
STAG1Q8WVM7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC25.14■■□□□ 1.62
STAG1Q8WVM7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.14■■□□□ 1.62
STAG1Q8WVM7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
STAG1Q8WVM7 AC053503.5-201ENST00000601508 636 ntBASIC25.14■■□□□ 1.62
STAG1Q8WVM7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.14■■□□□ 1.61
STAG1Q8WVM7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.61
STAG1Q8WVM7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
STAG1Q8WVM7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
STAG1Q8WVM7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
STAG1Q8WVM7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 AC104187.1-201ENST00000607510 612 ntBASIC25.12■■□□□ 1.61
STAG1Q8WVM7 RARRES2P11-201ENST00000635158 484 ntBASIC25.12■■□□□ 1.61
STAG1Q8WVM7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
STAG1Q8WVM7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 AC004911.1-201ENST00000416316 871 ntBASIC25.11■■□□□ 1.61
STAG1Q8WVM7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.11■■□□□ 1.61
STAG1Q8WVM7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 AC138907.5-202ENST00000569484 235 ntBASIC25.1■■□□□ 1.61
STAG1Q8WVM7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
STAG1Q8WVM7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
STAG1Q8WVM7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
STAG1Q8WVM7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
STAG1Q8WVM7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.09■■□□□ 1.61
STAG1Q8WVM7 KRT19P1-201ENST00000405746 1186 ntBASIC25.09■■□□□ 1.61
STAG1Q8WVM7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.09■■□□□ 1.61
STAG1Q8WVM7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.09■■□□□ 1.61
STAG1Q8WVM7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms