Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 AC142381.4-202ENST00000563973 229 ntBASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 AC092118.2-201ENST00000613495 667 ntBASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
U2AF1L4Q8WU68 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 CYP2T1P-201ENST00000432607 1285 ntBASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 AC013268.1-206ENST00000638368 961 ntBASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 AC112229.1-201ENST00000639295 961 ntBASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
U2AF1L4Q8WU68 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
U2AF1L4Q8WU68 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
U2AF1L4Q8WU68 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
U2AF1L4Q8WU68 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC24.33■■□□□ 1.49
U2AF1L4Q8WU68 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.33■■□□□ 1.49
U2AF1L4Q8WU68 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
U2AF1L4Q8WU68 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
U2AF1L4Q8WU68 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
U2AF1L4Q8WU68 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 KRT18P20-201ENST00000548986 1279 ntBASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 AC068338.2-201ENST00000563278 1430 ntBASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
U2AF1L4Q8WU68 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 AC083880.1-201ENST00000608266 535 ntBASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
U2AF1L4Q8WU68 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.3■■□□□ 1.48
U2AF1L4Q8WU68 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
U2AF1L4Q8WU68 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.3■■□□□ 1.48
U2AF1L4Q8WU68 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
U2AF1L4Q8WU68 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.3■■□□□ 1.48
U2AF1L4Q8WU68 AC010141.2-201ENST00000452426 721 ntBASIC24.3■■□□□ 1.48
U2AF1L4Q8WU68 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.3■■□□□ 1.48
U2AF1L4Q8WU68 AC006058.3-201ENST00000606217 1069 ntBASIC24.3■■□□□ 1.48
U2AF1L4Q8WU68 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.3■■□□□ 1.48
U2AF1L4Q8WU68 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.3■■□□□ 1.48
U2AF1L4Q8WU68 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
U2AF1L4Q8WU68 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 AC128676.1-201ENST00000454392 318 ntBASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
U2AF1L4Q8WU68 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
U2AF1L4Q8WU68 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
U2AF1L4Q8WU68 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
U2AF1L4Q8WU68 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
U2AF1L4Q8WU68 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
U2AF1L4Q8WU68 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.28■■□□□ 1.48
U2AF1L4Q8WU68 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
U2AF1L4Q8WU68 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
U2AF1L4Q8WU68 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC24.28■■□□□ 1.48
U2AF1L4Q8WU68 TERF1P5-201ENST00000477545 1207 ntBASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms