Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRFBP1Q8NEF9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRFBP1Q8NEF9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRFBP1Q8NEF9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SRFBP1Q8NEF9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRFBP1Q8NEF9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
SRFBP1Q8NEF9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.28■□□□□ 0.84
SRFBP1Q8NEF9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRFBP1Q8NEF9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRFBP1Q8NEF9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.28■□□□□ 0.84
SRFBP1Q8NEF9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRFBP1Q8NEF9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 AC010542.4-201ENST00000563151 1910 ntBASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 FBXW4P1-201ENST00000426721 2239 ntBASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 TPRG1LP1-201ENST00000598702 760 ntBASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 MIR6084-201ENST00000622012 110 ntBASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SRFBP1Q8NEF9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SRFBP1Q8NEF9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 ZNRF2P3-201ENST00000424200 374 ntBASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 AC123595.1-201ENST00000440769 1046 ntBASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 AC003102.1-202ENST00000563394 1796 ntBASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SRFBP1Q8NEF9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 LINC02228-203ENST00000641970 1355 ntBASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 AC244015.2-201ENST00000616358 1861 ntBASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 AC026471.6-201ENST00000622954 1905 ntBASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRFBP1Q8NEF9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRFBP1Q8NEF9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 YBX1P1-201ENST00000445822 960 ntBASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SRFBP1Q8NEF9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms