Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TTC39CQ8N584 AC010542.4-201ENST00000563151 1910 ntBASIC22.65■■□□□ 1.22
TTC39CQ8N584 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TTC39CQ8N584 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TTC39CQ8N584 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.64■■□□□ 1.22
TTC39CQ8N584 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39CQ8N584 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39CQ8N584 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.64■■□□□ 1.21
TTC39CQ8N584 DUX4L2-201ENST00000561772 1275 ntBASIC22.64■■□□□ 1.21
TTC39CQ8N584 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.64■■□□□ 1.21
TTC39CQ8N584 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39CQ8N584 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.64■■□□□ 1.21
TTC39CQ8N584 DUX4L6-201ENST00000626483 1275 ntBASIC22.64■■□□□ 1.21
TTC39CQ8N584 DUX4L1-201ENST00000627662 1275 ntBASIC22.64■■□□□ 1.21
TTC39CQ8N584 DUX4L8-201ENST00000629013 1275 ntBASIC22.64■■□□□ 1.21
TTC39CQ8N584 DUX4L3-201ENST00000630187 1275 ntBASIC22.64■■□□□ 1.21
TTC39CQ8N584 DUX4L7-201ENST00000630678 1275 ntBASIC22.64■■□□□ 1.21
TTC39CQ8N584 DUX4L5-201ENST00000630834 1275 ntBASIC22.64■■□□□ 1.21
TTC39CQ8N584 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39CQ8N584 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.64■■□□□ 1.21
TTC39CQ8N584 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39CQ8N584 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39CQ8N584 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
TTC39CQ8N584 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39CQ8N584 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39CQ8N584 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.63■■□□□ 1.21
TTC39CQ8N584 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
TTC39CQ8N584 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.63■■□□□ 1.21
TTC39CQ8N584 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.63■■□□□ 1.21
TTC39CQ8N584 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39CQ8N584 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39CQ8N584 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.63■■□□□ 1.21
TTC39CQ8N584 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.63■■□□□ 1.21
TTC39CQ8N584 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39CQ8N584 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
TTC39CQ8N584 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.63■■□□□ 1.21
TTC39CQ8N584 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39CQ8N584 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39CQ8N584 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39CQ8N584 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39CQ8N584 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.62■■□□□ 1.21
TTC39CQ8N584 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.62■■□□□ 1.21
TTC39CQ8N584 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39CQ8N584 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39CQ8N584 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
TTC39CQ8N584 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
TTC39CQ8N584 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.62■■□□□ 1.21
TTC39CQ8N584 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.62■■□□□ 1.21
TTC39CQ8N584 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39CQ8N584 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39CQ8N584 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39CQ8N584 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39CQ8N584 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.61■■□□□ 1.21
TTC39CQ8N584 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.61■■□□□ 1.21
TTC39CQ8N584 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
TTC39CQ8N584 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39CQ8N584 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
TTC39CQ8N584 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39CQ8N584 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.61■■□□□ 1.21
TTC39CQ8N584 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.61■■□□□ 1.21
TTC39CQ8N584 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TTC39CQ8N584 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC39CQ8N584 AC244015.2-201ENST00000616358 1861 ntBASIC22.6■■□□□ 1.21
TTC39CQ8N584 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
TTC39CQ8N584 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.6■■□□□ 1.21
TTC39CQ8N584 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC39CQ8N584 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.6■■□□□ 1.21
TTC39CQ8N584 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC39CQ8N584 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
TTC39CQ8N584 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TTC39CQ8N584 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.6■■□□□ 1.21
TTC39CQ8N584 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.6■■□□□ 1.21
TTC39CQ8N584 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.6■■□□□ 1.21
TTC39CQ8N584 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TTC39CQ8N584 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.6■■□□□ 1.21
TTC39CQ8N584 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TTC39CQ8N584 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC39CQ8N584 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC39CQ8N584 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC39CQ8N584 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC39CQ8N584 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TTC39CQ8N584 MIR935-201ENST00000401179 91 ntBASIC22.59■■□□□ 1.21
TTC39CQ8N584 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TTC39CQ8N584 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.59■■□□□ 1.21
TTC39CQ8N584 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC39CQ8N584 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.59■■□□□ 1.21
TTC39CQ8N584 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.59■■□□□ 1.21
TTC39CQ8N584 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TTC39CQ8N584 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TTC39CQ8N584 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
TTC39CQ8N584 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
TTC39CQ8N584 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TTC39CQ8N584 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TTC39CQ8N584 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
TTC39CQ8N584 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
TTC39CQ8N584 KRT19P1-201ENST00000405746 1186 ntBASIC22.58■■□□□ 1.21
TTC39CQ8N584 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.58■■□□□ 1.21
TTC39CQ8N584 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.58■■□□□ 1.21
TTC39CQ8N584 AC138907.5-202ENST00000569484 235 ntBASIC22.58■■□□□ 1.21
TTC39CQ8N584 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms