Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
VPS8Q8N3P4 AC073111.5-205ENST00000641717 521 ntBASIC33.52■■■□□ 2.96
VPS8Q8N3P4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC33.52■■■□□ 2.96
VPS8Q8N3P4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
VPS8Q8N3P4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC33.51■■■□□ 2.96
VPS8Q8N3P4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC33.51■■■□□ 2.95
VPS8Q8N3P4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
VPS8Q8N3P4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
VPS8Q8N3P4 KRT18P11-201ENST00000435214 1283 ntBASIC33.51■■■□□ 2.95
VPS8Q8N3P4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
VPS8Q8N3P4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC33.51■■■□□ 2.95
VPS8Q8N3P4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
VPS8Q8N3P4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
VPS8Q8N3P4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
VPS8Q8N3P4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC33.5■■■□□ 2.95
VPS8Q8N3P4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
VPS8Q8N3P4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC33.5■■■□□ 2.95
VPS8Q8N3P4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
VPS8Q8N3P4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC33.5■■■□□ 2.95
VPS8Q8N3P4 BID-214ENST00000617586 542 ntTSL 5 BASIC33.5■■■□□ 2.95
VPS8Q8N3P4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC33.5■■■□□ 2.95
VPS8Q8N3P4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC33.49■■■□□ 2.95
VPS8Q8N3P4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC33.49■■■□□ 2.95
VPS8Q8N3P4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC33.49■■■□□ 2.95
VPS8Q8N3P4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC33.49■■■□□ 2.95
VPS8Q8N3P4 AC090192.1-201ENST00000517740 490 ntBASIC33.49■■■□□ 2.95
VPS8Q8N3P4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC33.49■■■□□ 2.95
VPS8Q8N3P4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
VPS8Q8N3P4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC33.49■■■□□ 2.95
VPS8Q8N3P4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
VPS8Q8N3P4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC33.48■■■□□ 2.95
VPS8Q8N3P4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC33.48■■■□□ 2.95
VPS8Q8N3P4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC33.48■■■□□ 2.95
VPS8Q8N3P4 KRT18P20-201ENST00000548986 1279 ntBASIC33.48■■■□□ 2.95
VPS8Q8N3P4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC33.48■■■□□ 2.95
VPS8Q8N3P4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
VPS8Q8N3P4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC33.47■■■□□ 2.95
VPS8Q8N3P4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC33.47■■■□□ 2.95
VPS8Q8N3P4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC33.47■■■□□ 2.95
VPS8Q8N3P4 AL117328.2-201ENST00000624617 1940 ntBASIC33.47■■■□□ 2.95
VPS8Q8N3P4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC33.47■■■□□ 2.95
VPS8Q8N3P4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC33.46■■■□□ 2.95
VPS8Q8N3P4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC33.46■■■□□ 2.95
VPS8Q8N3P4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
VPS8Q8N3P4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
VPS8Q8N3P4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC33.46■■■□□ 2.95
VPS8Q8N3P4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
VPS8Q8N3P4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
VPS8Q8N3P4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC33.45■■■□□ 2.95
VPS8Q8N3P4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
VPS8Q8N3P4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
VPS8Q8N3P4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
VPS8Q8N3P4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
VPS8Q8N3P4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
VPS8Q8N3P4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
VPS8Q8N3P4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
VPS8Q8N3P4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC33.45■■■□□ 2.94
VPS8Q8N3P4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
VPS8Q8N3P4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
VPS8Q8N3P4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC33.45■■■□□ 2.94
VPS8Q8N3P4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
VPS8Q8N3P4 CDCA4P2-201ENST00000441182 718 ntBASIC33.45■■■□□ 2.94
VPS8Q8N3P4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC33.45■■■□□ 2.94
VPS8Q8N3P4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC33.45■■■□□ 2.94
VPS8Q8N3P4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
VPS8Q8N3P4 AC080038.1-201ENST00000611274 1154 ntBASIC33.45■■■□□ 2.94
VPS8Q8N3P4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC33.45■■■□□ 2.94
VPS8Q8N3P4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
VPS8Q8N3P4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
VPS8Q8N3P4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
VPS8Q8N3P4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC33.44■■■□□ 2.94
VPS8Q8N3P4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC33.44■■■□□ 2.94
VPS8Q8N3P4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
VPS8Q8N3P4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC33.44■■■□□ 2.94
VPS8Q8N3P4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC33.43■■■□□ 2.94
VPS8Q8N3P4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC33.42■■■□□ 2.94
VPS8Q8N3P4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
VPS8Q8N3P4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC33.42■■■□□ 2.94
VPS8Q8N3P4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC33.42■■■□□ 2.94
VPS8Q8N3P4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC33.42■■■□□ 2.94
VPS8Q8N3P4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
VPS8Q8N3P4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC33.41■■■□□ 2.94
VPS8Q8N3P4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
VPS8Q8N3P4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC33.41■■■□□ 2.94
VPS8Q8N3P4 AC011767.1-201ENST00000617410 1153 ntBASIC33.41■■■□□ 2.94
VPS8Q8N3P4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
VPS8Q8N3P4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC33.41■■■□□ 2.94
VPS8Q8N3P4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC33.41■■■□□ 2.94
VPS8Q8N3P4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC33.41■■■□□ 2.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms