Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC29.78■■■□□ 2.36
ARHGEF28Q8N1W1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ARHGEF28Q8N1W1 TERF1P5-201ENST00000477545 1207 ntBASIC29.78■■■□□ 2.36
ARHGEF28Q8N1W1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
ARHGEF28Q8N1W1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
ARHGEF28Q8N1W1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
ARHGEF28Q8N1W1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 RBM17P2-201ENST00000616397 1405 ntBASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC29.77■■■□□ 2.36
ARHGEF28Q8N1W1 AC073210.2-201ENST00000430369 194 ntBASIC29.76■■■□□ 2.36
ARHGEF28Q8N1W1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
ARHGEF28Q8N1W1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
ARHGEF28Q8N1W1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC29.76■■■□□ 2.36
ARHGEF28Q8N1W1 CD99P1-205ENST00000527459 561 ntBASIC29.76■■■□□ 2.36
ARHGEF28Q8N1W1 AC105036.2-201ENST00000569468 176 ntBASIC29.76■■■□□ 2.36
ARHGEF28Q8N1W1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
ARHGEF28Q8N1W1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC29.76■■■□□ 2.35
ARHGEF28Q8N1W1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC29.75■■■□□ 2.35
ARHGEF28Q8N1W1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ARHGEF28Q8N1W1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC29.75■■■□□ 2.35
ARHGEF28Q8N1W1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC29.75■■■□□ 2.35
ARHGEF28Q8N1W1 AC093787.1-201ENST00000450396 207 ntBASIC29.75■■■□□ 2.35
ARHGEF28Q8N1W1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 MKRN4P-201ENST00000444706 1521 ntBASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
ARHGEF28Q8N1W1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ARHGEF28Q8N1W1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ARHGEF28Q8N1W1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC29.73■■■□□ 2.35
ARHGEF28Q8N1W1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ARHGEF28Q8N1W1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
ARHGEF28Q8N1W1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
ARHGEF28Q8N1W1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ARHGEF28Q8N1W1 AC061975.6-201ENST00000579045 1553 ntBASIC29.73■■■□□ 2.35
ARHGEF28Q8N1W1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 AC083880.1-201ENST00000608266 535 ntBASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 AC008175.2-201ENST00000612840 297 ntBASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 AC003102.1-202ENST00000563394 1796 ntBASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
ARHGEF28Q8N1W1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
ARHGEF28Q8N1W1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC29.71■■■□□ 2.35
ARHGEF28Q8N1W1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC29.71■■■□□ 2.35
ARHGEF28Q8N1W1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
ARHGEF28Q8N1W1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
ARHGEF28Q8N1W1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC29.71■■■□□ 2.35
ARHGEF28Q8N1W1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
ARHGEF28Q8N1W1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
ARHGEF28Q8N1W1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ARHGEF28Q8N1W1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ARHGEF28Q8N1W1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ARHGEF28Q8N1W1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
ARHGEF28Q8N1W1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
ARHGEF28Q8N1W1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ARHGEF28Q8N1W1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
ARHGEF28Q8N1W1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.34
ARHGEF28Q8N1W1 AC080038.3-201ENST00000623346 1952 ntBASIC29.7■■■□□ 2.34
ARHGEF28Q8N1W1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC29.7■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms