Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.01■■□□□ 1.27
VPS52Q8N1B4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.01■■□□□ 1.27
VPS52Q8N1B4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS52Q8N1B4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23■■□□□ 1.27
VPS52Q8N1B4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
VPS52Q8N1B4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
VPS52Q8N1B4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23■■□□□ 1.27
VPS52Q8N1B4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS52Q8N1B4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS52Q8N1B4 AC005181.1-201ENST00000604782 1256 ntBASIC23■■□□□ 1.27
VPS52Q8N1B4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
VPS52Q8N1B4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
VPS52Q8N1B4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23■■□□□ 1.27
VPS52Q8N1B4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23■■□□□ 1.27
VPS52Q8N1B4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23■■□□□ 1.27
VPS52Q8N1B4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 PKD1P6-201ENST00000343738 4769 ntBASIC22.99■■□□□ 1.27
VPS52Q8N1B4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 AC079089.2-201ENST00000531211 1277 ntBASIC22.99■■□□□ 1.27
VPS52Q8N1B4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 AC142086.2-201ENST00000569753 217 ntBASIC22.99■■□□□ 1.27
VPS52Q8N1B4 MYCNOS-205ENST00000641950 531 ntBASIC22.99■■□□□ 1.27
VPS52Q8N1B4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
VPS52Q8N1B4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 LINC01960-201ENST00000563759 1884 ntBASIC22.98■■□□□ 1.27
VPS52Q8N1B4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 TSPY6P-201ENST00000448518 926 ntBASIC22.98■■□□□ 1.27
VPS52Q8N1B4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS52Q8N1B4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.97■■□□□ 1.27
VPS52Q8N1B4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 CD99P1-205ENST00000527459 561 ntBASIC22.96■■□□□ 1.27
VPS52Q8N1B4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.96■■□□□ 1.27
VPS52Q8N1B4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
VPS52Q8N1B4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
VPS52Q8N1B4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
VPS52Q8N1B4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
VPS52Q8N1B4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
VPS52Q8N1B4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.95■■□□□ 1.26
VPS52Q8N1B4 AP004607.7-201ENST00000527152 1677 ntBASIC22.95■■□□□ 1.26
VPS52Q8N1B4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.95■■□□□ 1.26
VPS52Q8N1B4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
VPS52Q8N1B4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.94■■□□□ 1.26
VPS52Q8N1B4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS52Q8N1B4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS52Q8N1B4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS52Q8N1B4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
VPS52Q8N1B4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms