Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.29■■□□□ 1.8
SLX4Q8IY92 AP003097.1-201ENST00000530657 1135 ntBASIC26.29■■□□□ 1.8
SLX4Q8IY92 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLX4Q8IY92 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SLX4Q8IY92 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SLX4Q8IY92 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SLX4Q8IY92 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SLX4Q8IY92 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SLX4Q8IY92 AL162412.1-201ENST00000567129 965 ntBASIC26.28■■□□□ 1.8
SLX4Q8IY92 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLX4Q8IY92 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLX4Q8IY92 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SLX4Q8IY92 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLX4Q8IY92 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.28■■□□□ 1.8
SLX4Q8IY92 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLX4Q8IY92 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.28■■□□□ 1.8
SLX4Q8IY92 ANOS2P-203ENST00000472227 1816 ntBASIC26.27■■□□□ 1.8
SLX4Q8IY92 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLX4Q8IY92 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLX4Q8IY92 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.27■■□□□ 1.8
SLX4Q8IY92 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLX4Q8IY92 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLX4Q8IY92 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLX4Q8IY92 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.27■■□□□ 1.8
SLX4Q8IY92 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SLX4Q8IY92 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SLX4Q8IY92 AC026366.1-201ENST00000488803 879 ntBASIC26.27■■□□□ 1.8
SLX4Q8IY92 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.27■■□□□ 1.8
SLX4Q8IY92 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.27■■□□□ 1.8
SLX4Q8IY92 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SLX4Q8IY92 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLX4Q8IY92 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.26■■□□□ 1.79
SLX4Q8IY92 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLX4Q8IY92 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.26■■□□□ 1.79
SLX4Q8IY92 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.26■■□□□ 1.79
SLX4Q8IY92 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SLX4Q8IY92 RPS2P4-201ENST00000476944 856 ntBASIC26.26■■□□□ 1.79
SLX4Q8IY92 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.26■■□□□ 1.79
SLX4Q8IY92 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SLX4Q8IY92 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.26■■□□□ 1.79
SLX4Q8IY92 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLX4Q8IY92 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLX4Q8IY92 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLX4Q8IY92 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLX4Q8IY92 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.25■■□□□ 1.79
SLX4Q8IY92 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.25■■□□□ 1.79
SLX4Q8IY92 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.25■■□□□ 1.79
SLX4Q8IY92 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLX4Q8IY92 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.25■■□□□ 1.79
SLX4Q8IY92 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLX4Q8IY92 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLX4Q8IY92 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SLX4Q8IY92 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SLX4Q8IY92 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SLX4Q8IY92 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.24■■□□□ 1.79
SLX4Q8IY92 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLX4Q8IY92 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
SLX4Q8IY92 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.24■■□□□ 1.79
SLX4Q8IY92 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.24■■□□□ 1.79
SLX4Q8IY92 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.24■■□□□ 1.79
SLX4Q8IY92 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.24■■□□□ 1.79
SLX4Q8IY92 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLX4Q8IY92 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.24■■□□□ 1.79
SLX4Q8IY92 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLX4Q8IY92 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SLX4Q8IY92 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLX4Q8IY92 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLX4Q8IY92 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26.23■■□□□ 1.79
SLX4Q8IY92 AC008403.3-201ENST00000598924 454 ntBASIC26.23■■□□□ 1.79
SLX4Q8IY92 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SLX4Q8IY92 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SLX4Q8IY92 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.23■■□□□ 1.79
SLX4Q8IY92 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
SLX4Q8IY92 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLX4Q8IY92 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.22■■□□□ 1.79
SLX4Q8IY92 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLX4Q8IY92 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SLX4Q8IY92 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SLX4Q8IY92 AC008175.2-201ENST00000612840 297 ntBASIC26.22■■□□□ 1.79
SLX4Q8IY92 AC073648.6-201ENST00000641589 218 ntBASIC26.22■■□□□ 1.79
SLX4Q8IY92 KRT16P2-201ENST00000414673 1423 ntBASIC26.22■■□□□ 1.79
SLX4Q8IY92 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLX4Q8IY92 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLX4Q8IY92 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.21■■□□□ 1.79
SLX4Q8IY92 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SLX4Q8IY92 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.21■■□□□ 1.79
SLX4Q8IY92 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.21■■□□□ 1.79
SLX4Q8IY92 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SLX4Q8IY92 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.21■■□□□ 1.79
SLX4Q8IY92 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SLX4Q8IY92 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.21■■□□□ 1.79
SLX4Q8IY92 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.21■■□□□ 1.79
SLX4Q8IY92 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.21■■□□□ 1.79
SLX4Q8IY92 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.2■■□□□ 1.79
SLX4Q8IY92 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.2■■□□□ 1.79
SLX4Q8IY92 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
SLX4Q8IY92 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.2■■□□□ 1.79
SLX4Q8IY92 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
SLX4Q8IY92 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLX4Q8IY92 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms