Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.66■■□□□ 1.38
DHX40Q8IX18 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.66■■□□□ 1.38
DHX40Q8IX18 AC099791.2-201ENST00000605725 427 ntBASIC23.66■■□□□ 1.38
DHX40Q8IX18 AC068587.7-201ENST00000641602 218 ntBASIC23.66■■□□□ 1.38
DHX40Q8IX18 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
DHX40Q8IX18 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DHX40Q8IX18 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
DHX40Q8IX18 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
DHX40Q8IX18 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DHX40Q8IX18 AC092667.1-201ENST00000434301 2586 ntBASIC23.65■■□□□ 1.38
DHX40Q8IX18 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DHX40Q8IX18 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DHX40Q8IX18 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DHX40Q8IX18 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.65■■□□□ 1.38
DHX40Q8IX18 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DHX40Q8IX18 OR2I1P-207ENST00000453522 948 ntBASIC23.65■■□□□ 1.38
DHX40Q8IX18 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DHX40Q8IX18 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DHX40Q8IX18 AC008406.3-201ENST00000620001 1374 ntBASIC23.65■■□□□ 1.38
DHX40Q8IX18 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
DHX40Q8IX18 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
DHX40Q8IX18 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
DHX40Q8IX18 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
DHX40Q8IX18 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.64■■□□□ 1.38
DHX40Q8IX18 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.64■■□□□ 1.38
DHX40Q8IX18 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.64■■□□□ 1.37
DHX40Q8IX18 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
DHX40Q8IX18 MIR3181-201ENST00000578512 73 ntBASIC23.64■■□□□ 1.37
DHX40Q8IX18 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.64■■□□□ 1.37
DHX40Q8IX18 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
DHX40Q8IX18 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.64■■□□□ 1.37
DHX40Q8IX18 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DHX40Q8IX18 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DHX40Q8IX18 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DHX40Q8IX18 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
DHX40Q8IX18 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
DHX40Q8IX18 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
DHX40Q8IX18 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
DHX40Q8IX18 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DHX40Q8IX18 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
DHX40Q8IX18 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
DHX40Q8IX18 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DHX40Q8IX18 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DHX40Q8IX18 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.62■■□□□ 1.37
DHX40Q8IX18 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DHX40Q8IX18 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DHX40Q8IX18 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
DHX40Q8IX18 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DHX40Q8IX18 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
DHX40Q8IX18 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DHX40Q8IX18 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DHX40Q8IX18 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
DHX40Q8IX18 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
DHX40Q8IX18 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.61■■□□□ 1.37
DHX40Q8IX18 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
DHX40Q8IX18 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DHX40Q8IX18 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
DHX40Q8IX18 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.61■■□□□ 1.37
DHX40Q8IX18 AC010141.3-201ENST00000456659 717 ntBASIC23.61■■□□□ 1.37
DHX40Q8IX18 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.61■■□□□ 1.37
DHX40Q8IX18 AC010525.1-201ENST00000585559 441 ntBASIC23.61■■□□□ 1.37
DHX40Q8IX18 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
DHX40Q8IX18 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
DHX40Q8IX18 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
DHX40Q8IX18 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.61■■□□□ 1.37
DHX40Q8IX18 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
DHX40Q8IX18 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
DHX40Q8IX18 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
DHX40Q8IX18 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DHX40Q8IX18 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DHX40Q8IX18 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
DHX40Q8IX18 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DHX40Q8IX18 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.6■■□□□ 1.37
DHX40Q8IX18 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.6■■□□□ 1.37
DHX40Q8IX18 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
DHX40Q8IX18 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
DHX40Q8IX18 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
DHX40Q8IX18 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DHX40Q8IX18 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.59■■□□□ 1.37
DHX40Q8IX18 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DHX40Q8IX18 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
DHX40Q8IX18 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DHX40Q8IX18 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DHX40Q8IX18 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DHX40Q8IX18 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
DHX40Q8IX18 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms