Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.14■□□□□ 0.97
TRIM42Q8IWZ5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM42Q8IWZ5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM42Q8IWZ5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM42Q8IWZ5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TRIM42Q8IWZ5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM42Q8IWZ5 AC026471.6-201ENST00000622954 1905 ntBASIC21.14■□□□□ 0.97
TRIM42Q8IWZ5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 MIR4787-201ENST00000607364 84 ntBASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM42Q8IWZ5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM42Q8IWZ5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 AC092667.1-201ENST00000434301 2586 ntBASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM42Q8IWZ5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRIM42Q8IWZ5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 LINC01006-201ENST00000333319 2292 ntBASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRIM42Q8IWZ5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM42Q8IWZ5 AL049796.1-201ENST00000565336 1766 ntBASIC21.08■□□□□ 0.97
TRIM42Q8IWZ5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM42Q8IWZ5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
TRIM42Q8IWZ5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM42Q8IWZ5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM42Q8IWZ5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM42Q8IWZ5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM42Q8IWZ5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM42Q8IWZ5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM42Q8IWZ5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM42Q8IWZ5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms