Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC00346Q8IVM7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00346Q8IVM7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 AC099791.1-201ENST00000416440 715 ntBASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 SMUG1P1-201ENST00000590640 811 ntBASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00346Q8IVM7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 IGHV3-19-201ENST00000521488 291 ntBASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 AC003102.1-202ENST00000563394 1796 ntBASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.77■□□□□ 0.6
LINC00346Q8IVM7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LINC00346Q8IVM7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LINC00346Q8IVM7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
LINC00346Q8IVM7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
LINC00346Q8IVM7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.77■□□□□ 0.59
LINC00346Q8IVM7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 FEM1AP4-201ENST00000443167 1987 ntBASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 AC133561.4-201ENST00000566112 224 ntBASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00346Q8IVM7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00346Q8IVM7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms