Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LYSMD2Q8IV50 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD2Q8IV50 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LYSMD2Q8IV50 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.66■□□□□ 0.58
LYSMD2Q8IV50 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD2Q8IV50 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.66■□□□□ 0.58
LYSMD2Q8IV50 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LYSMD2Q8IV50 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LYSMD2Q8IV50 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.66■□□□□ 0.58
LYSMD2Q8IV50 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.66■□□□□ 0.58
LYSMD2Q8IV50 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LYSMD2Q8IV50 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.66■□□□□ 0.58
LYSMD2Q8IV50 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LYSMD2Q8IV50 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LYSMD2Q8IV50 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.64■□□□□ 0.58
LYSMD2Q8IV50 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LYSMD2Q8IV50 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LYSMD2Q8IV50 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 MIR4449-201ENST00000578365 66 ntBASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 RNF126P1-201ENST00000567452 1320 ntBASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LYSMD2Q8IV50 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 LETM1P2-201ENST00000597330 2178 ntBASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LYSMD2Q8IV50 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms