Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AC133637.1-201ENST00000624115 1537 ntBASIC21.9■■□□□ 1.1
CCDC25Q86WR0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC25Q86WR0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC25Q86WR0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC25Q86WR0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC25Q86WR0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC25Q86WR0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC25Q86WR0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC25Q86WR0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC25Q86WR0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCDC25Q86WR0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC25Q86WR0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CCDC25Q86WR0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC25Q86WR0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC25Q86WR0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC25Q86WR0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.87■■□□□ 1.09
CCDC25Q86WR0 AC006455.2-201ENST00000429931 906 ntBASIC21.87■■□□□ 1.09
CCDC25Q86WR0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CCDC25Q86WR0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.87■■□□□ 1.09
CCDC25Q86WR0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CCDC25Q86WR0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCDC25Q86WR0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 pRNA.6-201ENST00000610482 90 ntBASIC21.86■■□□□ 1.09
CCDC25Q86WR0 pRNA.5-201ENST00000612139 90 ntBASIC21.86■■□□□ 1.09
CCDC25Q86WR0 pRNA.11-201ENST00000618423 90 ntBASIC21.86■■□□□ 1.09
CCDC25Q86WR0 pRNA.13-201ENST00000619112 90 ntBASIC21.86■■□□□ 1.09
CCDC25Q86WR0 AC241377.3-202ENST00000626088 1088 ntBASIC21.86■■□□□ 1.09
CCDC25Q86WR0 AC241585.3-202ENST00000628937 1088 ntBASIC21.86■■□□□ 1.09
CCDC25Q86WR0 AC245100.8-202ENST00000629247 1058 ntBASIC21.86■■□□□ 1.09
CCDC25Q86WR0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCDC25Q86WR0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 LINC01521-201ENST00000504184 1943 ntBASIC21.85■■□□□ 1.09
CCDC25Q86WR0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCDC25Q86WR0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC25Q86WR0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC25Q86WR0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC25Q86WR0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC25Q86WR0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC25Q86WR0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC25Q86WR0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCDC25Q86WR0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.84■■□□□ 1.09
CCDC25Q86WR0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.84■■□□□ 1.09
CCDC25Q86WR0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC25Q86WR0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC25Q86WR0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC25Q86WR0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC25Q86WR0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC25Q86WR0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC25Q86WR0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC25Q86WR0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCDC25Q86WR0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.83■■□□□ 1.09
CCDC25Q86WR0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.83■■□□□ 1.09
CCDC25Q86WR0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
CCDC25Q86WR0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.83■■□□□ 1.08
CCDC25Q86WR0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
CCDC25Q86WR0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CCDC25Q86WR0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms