Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.85
CD109Q6YHK3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC32.88■■■□□ 2.85
CD109Q6YHK3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC32.88■■■□□ 2.85
CD109Q6YHK3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC32.88■■■□□ 2.85
CD109Q6YHK3 AC060766.5-201ENST00000590539 871 ntBASIC32.88■■■□□ 2.85
CD109Q6YHK3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC32.88■■■□□ 2.85
CD109Q6YHK3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC32.88■■■□□ 2.85
CD109Q6YHK3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC32.88■■■□□ 2.85
CD109Q6YHK3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
CD109Q6YHK3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
CD109Q6YHK3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC32.87■■■□□ 2.85
CD109Q6YHK3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CD109Q6YHK3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC32.87■■■□□ 2.85
CD109Q6YHK3 C1QBPP2-201ENST00000528754 825 ntBASIC32.87■■■□□ 2.85
CD109Q6YHK3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
CD109Q6YHK3 CYP2T3P-201ENST00000601990 817 ntBASIC32.87■■■□□ 2.85
CD109Q6YHK3 AP006587.3-201ENST00000525742 1516 ntBASIC32.87■■■□□ 2.85
CD109Q6YHK3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
CD109Q6YHK3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CD109Q6YHK3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CD109Q6YHK3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC32.86■■■□□ 2.85
CD109Q6YHK3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CD109Q6YHK3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC32.86■■■□□ 2.85
CD109Q6YHK3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC32.86■■■□□ 2.85
CD109Q6YHK3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CD109Q6YHK3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC32.85■■■□□ 2.85
CD109Q6YHK3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CD109Q6YHK3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CD109Q6YHK3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC32.85■■■□□ 2.85
CD109Q6YHK3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CD109Q6YHK3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC32.85■■■□□ 2.85
CD109Q6YHK3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC32.85■■■□□ 2.85
CD109Q6YHK3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC32.85■■■□□ 2.85
CD109Q6YHK3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC32.85■■■□□ 2.85
CD109Q6YHK3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC32.85■■■□□ 2.85
CD109Q6YHK3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CD109Q6YHK3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC32.85■■■□□ 2.85
CD109Q6YHK3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC32.85■■■□□ 2.85
CD109Q6YHK3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CD109Q6YHK3 AC120498.10-201ENST00000621827 505 ntBASIC32.85■■■□□ 2.85
CD109Q6YHK3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC32.84■■■□□ 2.85
CD109Q6YHK3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CD109Q6YHK3 KRT18P21-201ENST00000515767 1272 ntBASIC32.84■■■□□ 2.85
CD109Q6YHK3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC32.84■■■□□ 2.85
CD109Q6YHK3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
CD109Q6YHK3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CD109Q6YHK3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
CD109Q6YHK3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CD109Q6YHK3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC32.83■■■□□ 2.85
CD109Q6YHK3 LSM12P1-201ENST00000411836 588 ntBASIC32.83■■■□□ 2.85
CD109Q6YHK3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC32.83■■■□□ 2.85
CD109Q6YHK3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CD109Q6YHK3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC32.83■■■□□ 2.85
CD109Q6YHK3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC32.83■■■□□ 2.85
CD109Q6YHK3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC32.83■■■□□ 2.85
CD109Q6YHK3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC32.83■■■□□ 2.85
CD109Q6YHK3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC32.83■■■□□ 2.85
CD109Q6YHK3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CD109Q6YHK3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC32.83■■■□□ 2.85
CD109Q6YHK3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CD109Q6YHK3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CD109Q6YHK3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC32.82■■■□□ 2.84
CD109Q6YHK3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC32.82■■■□□ 2.84
CD109Q6YHK3 KRT17P1-201ENST00000399211 1546 ntBASIC32.82■■■□□ 2.84
CD109Q6YHK3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CD109Q6YHK3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CD109Q6YHK3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC32.81■■■□□ 2.84
CD109Q6YHK3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
CD109Q6YHK3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CD109Q6YHK3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC32.81■■■□□ 2.84
CD109Q6YHK3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC32.81■■■□□ 2.84
CD109Q6YHK3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC32.81■■■□□ 2.84
CD109Q6YHK3 AL034346.1-201ENST00000568244 1277 ntBASIC32.81■■■□□ 2.84
CD109Q6YHK3 AC243732.1-201ENST00000612648 864 ntBASIC32.81■■■□□ 2.84
CD109Q6YHK3 AC008175.2-201ENST00000612840 297 ntBASIC32.81■■■□□ 2.84
CD109Q6YHK3 HLA-B-256ENST00000639848 1089 ntBASIC32.81■■■□□ 2.84
CD109Q6YHK3 AC142381.3-201ENST00000568208 1670 ntBASIC32.81■■■□□ 2.84
CD109Q6YHK3 AL139125.2-201ENST00000623134 1869 ntBASIC32.81■■■□□ 2.84
CD109Q6YHK3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
CD109Q6YHK3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
CD109Q6YHK3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC32.8■■■□□ 2.84
CD109Q6YHK3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC32.8■■■□□ 2.84
CD109Q6YHK3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CD109Q6YHK3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
CD109Q6YHK3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC32.8■■■□□ 2.84
CD109Q6YHK3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC32.8■■■□□ 2.84
CD109Q6YHK3 NME6-213ENST00000451657 871 ntTSL 2 BASIC32.8■■■□□ 2.84
CD109Q6YHK3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CD109Q6YHK3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
CD109Q6YHK3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC32.8■■■□□ 2.84
CD109Q6YHK3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
CD109Q6YHK3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CD109Q6YHK3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CD109Q6YHK3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CD109Q6YHK3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
CD109Q6YHK3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC32.79■■■□□ 2.84
CD109Q6YHK3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC32.79■■■□□ 2.84
CD109Q6YHK3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC32.79■■■□□ 2.84
CD109Q6YHK3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC32.79■■■□□ 2.84
CD109Q6YHK3 BX088651.1-201ENST00000540551 451 ntBASIC32.78■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms