Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL54Q6P161 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
MRPL54Q6P161 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MRPL54Q6P161 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL54Q6P161 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MRPL54Q6P161 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MRPL54Q6P161 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.04■□□□□ 0.16
MRPL54Q6P161 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MRPL54Q6P161 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL54Q6P161 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
MRPL54Q6P161 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL54Q6P161 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
MRPL54Q6P161 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.04■□□□□ 0.16
MRPL54Q6P161 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL54Q6P161 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL54Q6P161 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MRPL54Q6P161 AC016575.1-201ENST00000607026 382 ntBASIC16.04■□□□□ 0.16
MRPL54Q6P161 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL54Q6P161 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRPL54Q6P161 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.04■□□□□ 0.16
MRPL54Q6P161 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
MRPL54Q6P161 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL54Q6P161 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.03■□□□□ 0.16
MRPL54Q6P161 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.03■□□□□ 0.16
MRPL54Q6P161 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MRPL54Q6P161 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.03■□□□□ 0.16
MRPL54Q6P161 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL54Q6P161 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.03■□□□□ 0.16
MRPL54Q6P161 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL54Q6P161 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL54Q6P161 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL54Q6P161 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.03■□□□□ 0.16
MRPL54Q6P161 AC022413.1-201ENST00000624602 984 ntBASIC16.03■□□□□ 0.16
MRPL54Q6P161 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.03■□□□□ 0.16
MRPL54Q6P161 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL54Q6P161 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL54Q6P161 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL54Q6P161 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL54Q6P161 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL54Q6P161 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
MRPL54Q6P161 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL54Q6P161 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MRPL54Q6P161 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
MRPL54Q6P161 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL54Q6P161 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL54Q6P161 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL54Q6P161 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.02■□□□□ 0.16
MRPL54Q6P161 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.02■□□□□ 0.16
MRPL54Q6P161 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
MRPL54Q6P161 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MRPL54Q6P161 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MRPL54Q6P161 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MRPL54Q6P161 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MRPL54Q6P161 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.02■□□□□ 0.15
MRPL54Q6P161 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPL54Q6P161 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL54Q6P161 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
MRPL54Q6P161 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL54Q6P161 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL54Q6P161 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPL54Q6P161 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL54Q6P161 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
MRPL54Q6P161 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPL54Q6P161 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.01■□□□□ 0.15
MRPL54Q6P161 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL54Q6P161 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL54Q6P161 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL54Q6P161 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPL54Q6P161 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MRPL54Q6P161 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MRPL54Q6P161 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16■□□□□ 0.15
MRPL54Q6P161 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MRPL54Q6P161 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MRPL54Q6P161 AL020996.1-203ENST00000536896 2307 ntBASIC16■□□□□ 0.15
MRPL54Q6P161 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MRPL54Q6P161 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16■□□□□ 0.15
MRPL54Q6P161 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16■□□□□ 0.15
MRPL54Q6P161 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
MRPL54Q6P161 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
MRPL54Q6P161 AC087393.1-201ENST00000582896 145 ntBASIC16■□□□□ 0.15
MRPL54Q6P161 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16■□□□□ 0.15
MRPL54Q6P161 AC018755.3-202ENST00000596210 929 ntBASIC16■□□□□ 0.15
MRPL54Q6P161 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
MRPL54Q6P161 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
MRPL54Q6P161 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16■□□□□ 0.15
MRPL54Q6P161 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16■□□□□ 0.15
MRPL54Q6P161 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MRPL54Q6P161 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL54Q6P161 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL54Q6P161 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.99■□□□□ 0.15
MRPL54Q6P161 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL54Q6P161 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL54Q6P161 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
MRPL54Q6P161 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL54Q6P161 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
MRPL54Q6P161 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL54Q6P161 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.99■□□□□ 0.15
MRPL54Q6P161 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
MRPL54Q6P161 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
MRPL54Q6P161 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms