Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 AC233723.2-201ENST00000623798 2106 ntBASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 AC003102.1-202ENST00000563394 1796 ntBASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.78■■□□□ 1.4
SWSAP1Q6NVH7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 MFSD11-216ENST00000590393 1141 ntBASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SWSAP1Q6NVH7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SWSAP1Q6NVH7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.75■■□□□ 1.39
SWSAP1Q6NVH7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.75■■□□□ 1.39
SWSAP1Q6NVH7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SWSAP1Q6NVH7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.75■■□□□ 1.39
SWSAP1Q6NVH7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.75■■□□□ 1.39
SWSAP1Q6NVH7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SWSAP1Q6NVH7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SWSAP1Q6NVH7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SWSAP1Q6NVH7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SWSAP1Q6NVH7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 AC026185.1-201ENST00000445748 174 ntBASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 KRT18P20-201ENST00000548986 1279 ntBASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 MYCNOS-205ENST00000641950 531 ntBASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.74■■□□□ 1.39
SWSAP1Q6NVH7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 GUSBP5-202ENST00000510805 1989 ntBASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 SLC7A5P2-201ENST00000553010 536 ntBASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 AC242852.2-201ENST00000615738 1807 ntBASIC23.73■■□□□ 1.39
SWSAP1Q6NVH7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SWSAP1Q6NVH7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 FAM99A-202ENST00000538190 1989 ntBASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms