Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF9Q5VWM5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF9Q5VWM5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PRAMEF9Q5VWM5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF9Q5VWM5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEF9Q5VWM5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEF9Q5VWM5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF9Q5VWM5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF9Q5VWM5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.52■□□□□ 0.88
PRAMEF9Q5VWM5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PRAMEF9Q5VWM5 AC105265.2-201ENST00000467189 838 ntBASIC20.52■□□□□ 0.88
PRAMEF9Q5VWM5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.52■□□□□ 0.88
PRAMEF9Q5VWM5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.52■□□□□ 0.88
PRAMEF9Q5VWM5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF9Q5VWM5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF9Q5VWM5 AC005229.4-201ENST00000610085 2198 ntBASIC20.52■□□□□ 0.88
PRAMEF9Q5VWM5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.52■□□□□ 0.87
PRAMEF9Q5VWM5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PRAMEF9Q5VWM5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 AC005224.4-201ENST00000583262 1652 ntBASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 AC104564.3-201ENST00000582367 638 ntBASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 AF106564.1-201ENST00000607058 2553 ntBASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 AC009237.3-201ENST00000393279 1427 ntBASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PRAMEF9Q5VWM5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.5■□□□□ 0.87
PRAMEF9Q5VWM5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PRAMEF9Q5VWM5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PRAMEF9Q5VWM5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF9Q5VWM5 TPRG1LP1-201ENST00000598702 760 ntBASIC20.49■□□□□ 0.87
PRAMEF9Q5VWM5 MIR6084-201ENST00000622012 110 ntBASIC20.49■□□□□ 0.87
PRAMEF9Q5VWM5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF9Q5VWM5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF9Q5VWM5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF9Q5VWM5 FEM1AP4-201ENST00000443167 1987 ntBASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF9Q5VWM5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF9Q5VWM5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PRAMEF9Q5VWM5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF9Q5VWM5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF9Q5VWM5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF9Q5VWM5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF9Q5VWM5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF9Q5VWM5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms