Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCGF3Q3KNV8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 ZNRF2P3-201ENST00000424200 374 ntBASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 AP005435.1-201ENST00000529293 1178 ntBASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCGF3Q3KNV8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 AC068587.7-201ENST00000641602 218 ntBASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCGF3Q3KNV8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 IRS3P-201ENST00000223076 1006 ntBASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 IGHV3-19-201ENST00000521488 291 ntBASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCGF3Q3KNV8 AC004687.1-201ENST00000579003 1625 ntBASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 MIR935-201ENST00000401179 91 ntBASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCGF3Q3KNV8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCGF3Q3KNV8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.58
PCGF3Q3KNV8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCGF3Q3KNV8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms