Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC087499.1-201ENST00000418141 1075 ntBASIC13.41□□□□□ -0.26
HSPG2P98160 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.41□□□□□ -0.26
HSPG2P98160 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.41□□□□□ -0.26
HSPG2P98160 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HSPG2P98160 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HSPG2P98160 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HSPG2P98160 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC13.4□□□□□ -0.26
HSPG2P98160 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.4□□□□□ -0.26
HSPG2P98160 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HSPG2P98160 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
HSPG2P98160 AC069544.1-201ENST00000609399 999 ntBASIC13.4□□□□□ -0.26
HSPG2P98160 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HSPG2P98160 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HSPG2P98160 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HSPG2P98160 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HSPG2P98160 RPS2P55-201ENST00000397318 883 ntBASIC13.4□□□□□ -0.26
HSPG2P98160 AC107956.1-201ENST00000494359 873 ntBASIC13.4□□□□□ -0.26
HSPG2P98160 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.4□□□□□ -0.26
HSPG2P98160 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
HSPG2P98160 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HSPG2P98160 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HSPG2P98160 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.4□□□□□ -0.26
HSPG2P98160 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.4□□□□□ -0.26
HSPG2P98160 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.4□□□□□ -0.26
HSPG2P98160 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC13.4□□□□□ -0.26
HSPG2P98160 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HSPG2P98160 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HSPG2P98160 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC13.4□□□□□ -0.27
HSPG2P98160 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HSPG2P98160 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.39□□□□□ -0.27
HSPG2P98160 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.39□□□□□ -0.27
HSPG2P98160 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HSPG2P98160 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HSPG2P98160 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC13.39□□□□□ -0.27
HSPG2P98160 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC13.39□□□□□ -0.27
HSPG2P98160 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HSPG2P98160 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HSPG2P98160 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HSPG2P98160 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.39□□□□□ -0.27
HSPG2P98160 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HSPG2P98160 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HSPG2P98160 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC13.39□□□□□ -0.27
HSPG2P98160 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HSPG2P98160 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HSPG2P98160 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.39□□□□□ -0.27
HSPG2P98160 RN7SL471P-201ENST00000580476 299 ntBASIC13.39□□□□□ -0.27
HSPG2P98160 MIR4785-201ENST00000585005 73 ntBASIC13.39□□□□□ -0.27
HSPG2P98160 HLA-B-256ENST00000639848 1089 ntBASIC13.39□□□□□ -0.27
HSPG2P98160 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HSPG2P98160 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HSPG2P98160 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.39□□□□□ -0.27
HSPG2P98160 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.39□□□□□ -0.27
HSPG2P98160 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HSPG2P98160 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HSPG2P98160 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HSPG2P98160 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HSPG2P98160 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.38□□□□□ -0.27
HSPG2P98160 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.38□□□□□ -0.27
HSPG2P98160 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.38□□□□□ -0.27
HSPG2P98160 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HSPG2P98160 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HSPG2P98160 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.38□□□□□ -0.27
HSPG2P98160 AL355075.4-201ENST00000554988 638 ntBASIC13.38□□□□□ -0.27
HSPG2P98160 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.38□□□□□ -0.27
HSPG2P98160 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HSPG2P98160 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HSPG2P98160 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HSPG2P98160 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC13.38□□□□□ -0.27
HSPG2P98160 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
HSPG2P98160 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC13.37□□□□□ -0.27
HSPG2P98160 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HSPG2P98160 AL353803.4-201ENST00000565882 1934 ntBASIC13.37□□□□□ -0.27
HSPG2P98160 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HSPG2P98160 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HSPG2P98160 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HSPG2P98160 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
HSPG2P98160 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.37□□□□□ -0.27
HSPG2P98160 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HSPG2P98160 AC145285.6-201ENST00000604632 637 ntBASIC13.37□□□□□ -0.27
HSPG2P98160 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
HSPG2P98160 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HSPG2P98160 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HSPG2P98160 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HSPG2P98160 LINC00543-201ENST00000567234 1845 ntBASIC13.37□□□□□ -0.27
HSPG2P98160 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HSPG2P98160 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
HSPG2P98160 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HSPG2P98160 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
HSPG2P98160 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.36□□□□□ -0.27
HSPG2P98160 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.36□□□□□ -0.27
HSPG2P98160 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HSPG2P98160 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HSPG2P98160 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HSPG2P98160 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HSPG2P98160 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
HSPG2P98160 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.36□□□□□ -0.27
HSPG2P98160 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HSPG2P98160 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HSPG2P98160 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HSPG2P98160 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms