Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXG1P55316 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXG1P55316 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXG1P55316 KRT87P-202ENST00000534226 1464 ntBASIC18.72■□□□□ 0.59
FOXG1P55316 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXG1P55316 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.72■□□□□ 0.59
FOXG1P55316 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.72■□□□□ 0.59
FOXG1P55316 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.72■□□□□ 0.59
FOXG1P55316 AC092437.1-201ENST00000624794 1048 ntBASIC18.72■□□□□ 0.59
FOXG1P55316 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXG1P55316 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXG1P55316 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXG1P55316 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FOXG1P55316 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
FOXG1P55316 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXG1P55316 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXG1P55316 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXG1P55316 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXG1P55316 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
FOXG1P55316 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXG1P55316 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.71■□□□□ 0.59
FOXG1P55316 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.71■□□□□ 0.59
FOXG1P55316 C11orf96-202ENST00000528572 1834 ntBASIC18.71■□□□□ 0.59
FOXG1P55316 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXG1P55316 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
FOXG1P55316 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXG1P55316 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.71■□□□□ 0.59
FOXG1P55316 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
FOXG1P55316 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
FOXG1P55316 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
FOXG1P55316 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXG1P55316 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXG1P55316 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXG1P55316 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXG1P55316 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXG1P55316 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXG1P55316 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXG1P55316 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXG1P55316 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXG1P55316 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.7■□□□□ 0.58
FOXG1P55316 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXG1P55316 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXG1P55316 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
FOXG1P55316 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXG1P55316 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXG1P55316 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXG1P55316 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXG1P55316 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXG1P55316 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
FOXG1P55316 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXG1P55316 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
FOXG1P55316 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXG1P55316 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXG1P55316 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXG1P55316 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXG1P55316 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXG1P55316 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXG1P55316 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXG1P55316 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXG1P55316 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXG1P55316 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXG1P55316 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXG1P55316 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXG1P55316 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXG1P55316 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXG1P55316 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXG1P55316 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXG1P55316 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXG1P55316 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FOXG1P55316 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXG1P55316 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXG1P55316 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
FOXG1P55316 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.68■□□□□ 0.58
FOXG1P55316 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXG1P55316 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
FOXG1P55316 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.68■□□□□ 0.58
FOXG1P55316 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXG1P55316 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FOXG1P55316 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXG1P55316 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXG1P55316 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXG1P55316 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXG1P55316 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXG1P55316 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXG1P55316 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXG1P55316 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXG1P55316 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXG1P55316 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FOXG1P55316 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXG1P55316 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXG1P55316 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.67■□□□□ 0.58
FOXG1P55316 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXG1P55316 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXG1P55316 EEF1DP3-203ENST00000566025 782 ntBASIC18.67■□□□□ 0.58
FOXG1P55316 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.67■□□□□ 0.58
FOXG1P55316 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXG1P55316 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXG1P55316 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
FOXG1P55316 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXG1P55316 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms