Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.81■■□□□ 1.08
CDH4P55283 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH4P55283 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH4P55283 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH4P55283 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH4P55283 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH4P55283 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH4P55283 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH4P55283 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH4P55283 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDH4P55283 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH4P55283 AC138907.5-202ENST00000569484 235 ntBASIC21.8■■□□□ 1.08
CDH4P55283 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH4P55283 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH4P55283 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.8■■□□□ 1.08
CDH4P55283 C11orf96-202ENST00000528572 1834 ntBASIC21.8■■□□□ 1.08
CDH4P55283 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH4P55283 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH4P55283 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH4P55283 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH4P55283 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH4P55283 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH4P55283 AC010542.4-201ENST00000563151 1910 ntBASIC21.79■■□□□ 1.08
CDH4P55283 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH4P55283 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH4P55283 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH4P55283 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH4P55283 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH4P55283 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH4P55283 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH4P55283 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.79■■□□□ 1.08
CDH4P55283 AC137761.2-201ENST00000561729 223 ntBASIC21.79■■□□□ 1.08
CDH4P55283 AC145350.3-201ENST00000569033 163 ntBASIC21.79■■□□□ 1.08
CDH4P55283 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH4P55283 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH4P55283 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH4P55283 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH4P55283 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH4P55283 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH4P55283 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH4P55283 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH4P55283 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH4P55283 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH4P55283 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH4P55283 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH4P55283 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH4P55283 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH4P55283 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.78■■□□□ 1.08
CDH4P55283 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.78■■□□□ 1.08
CDH4P55283 AP001160.3-201ENST00000601484 763 ntBASIC21.78■■□□□ 1.08
CDH4P55283 IKBKGP1-201ENST00000612193 1073 ntBASIC21.78■■□□□ 1.08
CDH4P55283 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH4P55283 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH4P55283 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.78■■□□□ 1.08
CDH4P55283 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH4P55283 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH4P55283 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH4P55283 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.77■■□□□ 1.08
CDH4P55283 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH4P55283 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH4P55283 AC010141.2-201ENST00000452426 721 ntBASIC21.77■■□□□ 1.08
CDH4P55283 AC092437.1-201ENST00000624794 1048 ntBASIC21.77■■□□□ 1.08
CDH4P55283 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH4P55283 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.77■■□□□ 1.07
CDH4P55283 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
CDH4P55283 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH4P55283 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CDH4P55283 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH4P55283 AC016769.1-201ENST00000409132 1010 ntBASIC21.76■■□□□ 1.07
CDH4P55283 AC006015.1-201ENST00000429970 570 ntBASIC21.76■■□□□ 1.07
CDH4P55283 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CDH4P55283 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.76■■□□□ 1.07
CDH4P55283 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH4P55283 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH4P55283 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH4P55283 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH4P55283 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.75■■□□□ 1.07
CDH4P55283 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH4P55283 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH4P55283 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH4P55283 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH4P55283 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.75■■□□□ 1.07
CDH4P55283 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.75■■□□□ 1.07
CDH4P55283 AL137784.2-201ENST00000607332 1000 ntBASIC21.75■■□□□ 1.07
CDH4P55283 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH4P55283 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH4P55283 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDH4P55283 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH4P55283 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDH4P55283 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH4P55283 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CDH4P55283 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH4P55283 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH4P55283 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH4P55283 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH4P55283 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.74■■□□□ 1.07
CDH4P55283 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH4P55283 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.74■■□□□ 1.07
CDH4P55283 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH4P55283 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms