Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.48■□□□□ 0.39
PRRX1P54821 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRRX1P54821 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.47■□□□□ 0.39
PRRX1P54821 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.47■□□□□ 0.39
PRRX1P54821 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRRX1P54821 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PRRX1P54821 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRRX1P54821 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.47■□□□□ 0.39
PRRX1P54821 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRRX1P54821 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRRX1P54821 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PRRX1P54821 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRRX1P54821 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PRRX1P54821 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PRRX1P54821 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRRX1P54821 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRRX1P54821 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRRX1P54821 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRRX1P54821 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRRX1P54821 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRRX1P54821 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.46■□□□□ 0.39
PRRX1P54821 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRRX1P54821 FAM99A-202ENST00000538190 1989 ntBASIC17.46■□□□□ 0.39
PRRX1P54821 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRRX1P54821 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PRRX1P54821 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRRX1P54821 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRRX1P54821 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRRX1P54821 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRRX1P54821 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.46■□□□□ 0.39
PRRX1P54821 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PRRX1P54821 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRRX1P54821 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRRX1P54821 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRRX1P54821 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRRX1P54821 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRRX1P54821 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRRX1P54821 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
PRRX1P54821 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.45■□□□□ 0.38
PRRX1P54821 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.45■□□□□ 0.38
PRRX1P54821 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.45■□□□□ 0.38
PRRX1P54821 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRRX1P54821 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.45■□□□□ 0.38
PRRX1P54821 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PRRX1P54821 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.45■□□□□ 0.38
PRRX1P54821 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.45■□□□□ 0.38
PRRX1P54821 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.45■□□□□ 0.38
PRRX1P54821 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.45■□□□□ 0.38
PRRX1P54821 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.45■□□□□ 0.38
PRRX1P54821 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.45■□□□□ 0.38
PRRX1P54821 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRRX1P54821 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRRX1P54821 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRRX1P54821 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.45■□□□□ 0.38
PRRX1P54821 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PRRX1P54821 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRRX1P54821 SLC25A24-204ENST00000569674 2357 ntBASIC17.44■□□□□ 0.38
PRRX1P54821 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRRX1P54821 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRRX1P54821 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRRX1P54821 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PRRX1P54821 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.44■□□□□ 0.38
PRRX1P54821 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
PRRX1P54821 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.44■□□□□ 0.38
PRRX1P54821 AC104564.3-201ENST00000582367 638 ntBASIC17.44■□□□□ 0.38
PRRX1P54821 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
PRRX1P54821 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRRX1P54821 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
PRRX1P54821 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRRX1P54821 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.44■□□□□ 0.38
PRRX1P54821 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRRX1P54821 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PRRX1P54821 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRRX1P54821 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRRX1P54821 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRRX1P54821 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRRX1P54821 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRRX1P54821 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.43■□□□□ 0.38
PRRX1P54821 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.43■□□□□ 0.38
PRRX1P54821 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.43■□□□□ 0.38
PRRX1P54821 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PRRX1P54821 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRRX1P54821 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRRX1P54821 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRRX1P54821 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRRX1P54821 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PRRX1P54821 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PRRX1P54821 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PRRX1P54821 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRRX1P54821 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.42■□□□□ 0.38
PRRX1P54821 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PRRX1P54821 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.42■□□□□ 0.38
PRRX1P54821 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRRX1P54821 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRRX1P54821 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRRX1P54821 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRRX1P54821 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRRX1P54821 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRRX1P54821 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms