Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NUBP1P53384 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NUBP1P53384 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
NUBP1P53384 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.39■■□□□ 1.01
NUBP1P53384 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.39■■□□□ 1.01
NUBP1P53384 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC21.39■■□□□ 1.01
NUBP1P53384 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.39■■□□□ 1.01
NUBP1P53384 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
NUBP1P53384 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.39■■□□□ 1.01
NUBP1P53384 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.39■■□□□ 1.01
NUBP1P53384 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.39■■□□□ 1.01
NUBP1P53384 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NUBP1P53384 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NUBP1P53384 RPS2P55-201ENST00000397318 883 ntBASIC21.38■■□□□ 1.01
NUBP1P53384 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC21.38■■□□□ 1.01
NUBP1P53384 AC107956.1-201ENST00000494359 873 ntBASIC21.38■■□□□ 1.01
NUBP1P53384 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.38■■□□□ 1.01
NUBP1P53384 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.38■■□□□ 1.01
NUBP1P53384 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NUBP1P53384 AL034346.1-201ENST00000568244 1277 ntBASIC21.38■■□□□ 1.01
NUBP1P53384 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.38■■□□□ 1.01
NUBP1P53384 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
NUBP1P53384 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.38■■□□□ 1.01
NUBP1P53384 AP003733.4-201ENST00000623785 1697 ntBASIC21.37■■□□□ 1.01
NUBP1P53384 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
NUBP1P53384 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NUBP1P53384 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.37■■□□□ 1.01
NUBP1P53384 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NUBP1P53384 AC087499.1-201ENST00000418141 1075 ntBASIC21.37■■□□□ 1.01
NUBP1P53384 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.37■■□□□ 1.01
NUBP1P53384 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.37■■□□□ 1.01
NUBP1P53384 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
NUBP1P53384 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.37■■□□□ 1.01
NUBP1P53384 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
NUBP1P53384 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
NUBP1P53384 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
NUBP1P53384 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.37■■□□□ 1.01
NUBP1P53384 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.37■■□□□ 1.01
NUBP1P53384 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.37■■□□□ 1.01
NUBP1P53384 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
NUBP1P53384 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
NUBP1P53384 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NUBP1P53384 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NUBP1P53384 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NUBP1P53384 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NUBP1P53384 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NUBP1P53384 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NUBP1P53384 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NUBP1P53384 MIR4785-201ENST00000585005 73 ntBASIC21.36■■□□□ 1.01
NUBP1P53384 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NUBP1P53384 AC005786.4-201ENST00000623369 682 ntBASIC21.36■■□□□ 1.01
NUBP1P53384 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NUBP1P53384 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NUBP1P53384 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NUBP1P53384 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.36■■□□□ 1.01
NUBP1P53384 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NUBP1P53384 RBM17P2-201ENST00000616397 1405 ntBASIC21.36■■□□□ 1.01
NUBP1P53384 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.36■■□□□ 1.01
NUBP1P53384 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
NUBP1P53384 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NUBP1P53384 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NUBP1P53384 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
NUBP1P53384 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NUBP1P53384 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.35■■□□□ 1.01
NUBP1P53384 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.35■■□□□ 1.01
NUBP1P53384 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NUBP1P53384 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.35■■□□□ 1.01
NUBP1P53384 PNMA6B-201ENST00000538162 1200 ntBASIC21.35■■□□□ 1.01
NUBP1P53384 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.35■■□□□ 1.01
NUBP1P53384 AC100791.3-201ENST00000617619 330 ntBASIC21.35■■□□□ 1.01
NUBP1P53384 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NUBP1P53384 AL135905.2-201ENST00000584934 1404 ntBASIC21.35■■□□□ 1.01
NUBP1P53384 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
NUBP1P53384 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NUBP1P53384 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.34■■□□□ 1.01
NUBP1P53384 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.34■■□□□ 1.01
NUBP1P53384 CD177P1-201ENST00000606252 935 ntBASIC21.34■■□□□ 1.01
NUBP1P53384 AL590326.2-201ENST00000625139 305 ntBASIC21.34■■□□□ 1.01
NUBP1P53384 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 KRT16P2-201ENST00000414673 1423 ntBASIC21.34■■□□□ 1.01
NUBP1P53384 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.34■■□□□ 1.01
NUBP1P53384 AC079630.1-202ENST00000618127 1840 ntBASIC21.34■■□□□ 1.01
NUBP1P53384 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NUBP1P53384 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NUBP1P53384 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.33■■□□□ 1.01
NUBP1P53384 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.33■■□□□ 1.01
NUBP1P53384 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NUBP1P53384 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.33■■□□□ 1.01
NUBP1P53384 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
NUBP1P53384 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms