Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGA2P52926 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA2P52926 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGA2P52926 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA2P52926 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA2P52926 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA2P52926 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGA2P52926 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.44■□□□□ 0.7
HMGA2P52926 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HMGA2P52926 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA2P52926 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA2P52926 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HMGA2P52926 AP004607.7-201ENST00000527152 1677 ntBASIC19.44■□□□□ 0.7
HMGA2P52926 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA2P52926 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA2P52926 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA2P52926 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA2P52926 AC010525.1-201ENST00000585559 441 ntBASIC19.44■□□□□ 0.7
HMGA2P52926 AL356740.2-201ENST00000601559 647 ntBASIC19.44■□□□□ 0.7
HMGA2P52926 AC092171.4-201ENST00000609130 632 ntBASIC19.44■□□□□ 0.7
HMGA2P52926 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.44■□□□□ 0.7
HMGA2P52926 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA2P52926 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HMGA2P52926 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HMGA2P52926 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
HMGA2P52926 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.43■□□□□ 0.7
HMGA2P52926 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 MIR3621-201ENST00000580529 85 ntBASIC19.43■□□□□ 0.7
HMGA2P52926 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HMGA2P52926 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HMGA2P52926 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
HMGA2P52926 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGA2P52926 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HMGA2P52926 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGA2P52926 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGA2P52926 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
HMGA2P52926 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGA2P52926 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.42■□□□□ 0.7
HMGA2P52926 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.42■□□□□ 0.7
HMGA2P52926 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGA2P52926 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HMGA2P52926 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HMGA2P52926 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGA2P52926 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HMGA2P52926 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGA2P52926 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGA2P52926 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGA2P52926 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.41■□□□□ 0.7
HMGA2P52926 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HMGA2P52926 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
HMGA2P52926 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.41■□□□□ 0.7
HMGA2P52926 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 KRT16P3-201ENST00000439127 1283 ntBASIC19.41■□□□□ 0.7
HMGA2P52926 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 AP005435.1-201ENST00000529293 1178 ntBASIC19.41■□□□□ 0.7
HMGA2P52926 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGA2P52926 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.41■□□□□ 0.7
HMGA2P52926 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMGA2P52926 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGA2P52926 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGA2P52926 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HMGA2P52926 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGA2P52926 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGA2P52926 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HMGA2P52926 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGA2P52926 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HMGA2P52926 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGA2P52926 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HMGA2P52926 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGA2P52926 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGA2P52926 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMGA2P52926 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HMGA2P52926 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMGA2P52926 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HMGA2P52926 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms