Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF140P52738 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
ZNF140P52738 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF140P52738 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.24■□□□□ 0.99
ZNF140P52738 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF140P52738 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF140P52738 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF140P52738 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF140P52738 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF140P52738 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF140P52738 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF140P52738 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF140P52738 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF140P52738 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF140P52738 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF140P52738 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF140P52738 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF140P52738 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF140P52738 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.23■□□□□ 0.99
ZNF140P52738 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.23■□□□□ 0.99
ZNF140P52738 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF140P52738 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ZNF140P52738 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF140P52738 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF140P52738 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF140P52738 Z98882.1-201ENST00000622160 2253 ntBASIC21.22■□□□□ 0.99
ZNF140P52738 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
ZNF140P52738 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF140P52738 CLDN5-201ENST00000403084 2357 ntBASIC21.22■□□□□ 0.99
ZNF140P52738 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF140P52738 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF140P52738 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.22■□□□□ 0.99
ZNF140P52738 YBX1P1-201ENST00000445822 960 ntBASIC21.22■□□□□ 0.99
ZNF140P52738 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF140P52738 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.22■□□□□ 0.99
ZNF140P52738 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ZNF140P52738 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.22■□□□□ 0.99
ZNF140P52738 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.22■□□□□ 0.99
ZNF140P52738 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ZNF140P52738 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF140P52738 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF140P52738 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF140P52738 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF140P52738 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF140P52738 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF140P52738 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ZNF140P52738 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF140P52738 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF140P52738 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF140P52738 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF140P52738 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF140P52738 AC007375.3-201ENST00000600936 2314 ntBASIC21.21■□□□□ 0.99
ZNF140P52738 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF140P52738 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ZNF140P52738 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF140P52738 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.21■□□□□ 0.99
ZNF140P52738 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF140P52738 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF140P52738 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF140P52738 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF140P52738 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF140P52738 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF140P52738 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF140P52738 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
ZNF140P52738 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
ZNF140P52738 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF140P52738 AC123595.1-201ENST00000440769 1046 ntBASIC21.2■□□□□ 0.98
ZNF140P52738 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.2■□□□□ 0.98
ZNF140P52738 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.2■□□□□ 0.98
ZNF140P52738 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 LINC02228-203ENST00000641970 1355 ntBASIC21.2■□□□□ 0.98
ZNF140P52738 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF140P52738 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF140P52738 AC026310.3-201ENST00000625186 2373 ntBASIC21.19■□□□□ 0.98
ZNF140P52738 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF140P52738 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.19■□□□□ 0.98
ZNF140P52738 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF140P52738 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF140P52738 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF140P52738 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF140P52738 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF140P52738 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.19■□□□□ 0.98
ZNF140P52738 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF140P52738 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF140P52738 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF140P52738 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF140P52738 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms