Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeast

Predictions only

Length 291 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	P49954	IRC18	YJL037W	675 nt		4.31	□□□□□ -1.72
NIT3	P49954	YLR154W-F	YLR154W-F	141 nt		4.31	□□□□□ -1.72
NIT3	P49954	COQ9	YLR201C	783 nt		4.31	□□□□□ -1.72
NIT3	P49954	SYM1	YLR251W	594 nt		4.31	□□□□□ -1.72
NIT3	P49954	YLR252W	YLR252W	306 nt		4.31	□□□□□ -1.72
NIT3	P49954	RPS19A	YOL121C	435 nt		4.31	□□□□□ -1.72
NIT3	P49954	APD1	YBR151W	951 nt		4.31	□□□□□ -1.72
NIT3	P49954	ROK1	YGL171W	1695 nt		4.31	□□□□□ -1.72
NIT3	P49954	STP1	YDR463W	1560 nt		4.31	□□□□□ -1.72
NIT3	P49954	GCN20	YFR009W	2259 nt		4.3	□□□□□ -1.72
NIT3	P49954	SKG6	YHR149C	2205 nt		4.3	□□□□□ -1.72
NIT3	P49954	YLR152C	YLR152C	1731 nt		4.3	□□□□□ -1.72
NIT3	P49954	SIP1	YDR422C	2448 nt		4.3	□□□□□ -1.72
NIT3	P49954	PHR1	YOR386W	1698 nt		4.3	□□□□□ -1.72
NIT3	P49954	MFA1	YDR461W	111 nt		4.3	□□□□□ -1.72
NIT3	P49954	YFL015C	YFL015C	495 nt		4.3	□□□□□ -1.72
NIT3	P49954	AML1	YGR001C	747 nt		4.3	□□□□□ -1.72
NIT3	P49954	tR(ACG)J	tR(ACG)J	73 nt		4.3	□□□□□ -1.72
NIT3	P49954	YIL029C	YIL029C	429 nt		4.3	□□□□□ -1.72
NIT3	P49954	YJL119C	YJL119C	324 nt		4.3	□□□□□ -1.72
NIT3	P49954	MIM2	YLR099W-A	264 nt		4.3	□□□□□ -1.72
NIT3	P49954	YLR257W	YLR257W	966 nt		4.3	□□□□□ -1.72
NIT3	P49954	YLR406C-A	YLR406C-A	150 nt		4.3	□□□□□ -1.72
NIT3	P49954	ATX2	YOR079C	942 nt		4.3	□□□□□ -1.72
NIT3	P49954	YPL261C	YPL261C	309 nt		4.3	□□□□□ -1.72
NIT3	P49954	YPR170W-A	YPR170W-A	186 nt		4.3	□□□□□ -1.72
NIT3	P49954	VHR1	YIL056W	1923 nt		4.3	□□□□□ -1.72
NIT3	P49954	NEL1	YHR035W	1893 nt		4.3	□□□□□ -1.72
NIT3	P49954	UBP12	YJL197W	3765 nt		4.3	□□□□□ -1.72
NIT3	P49954	MNT2	YGL257C	1677 nt		4.29	□□□□□ -1.72
NIT3	P49954	SPO23	YBR250W	1572 nt		4.29	□□□□□ -1.72
NIT3	P49954	YDR157W	YDR157W	402 nt		4.29	□□□□□ -1.72
NIT3	P49954	YDR340W	YDR340W	303 nt		4.29	□□□□□ -1.72
NIT3	P49954	YEL067C	YEL067C	588 nt		4.29	□□□□□ -1.72
NIT3	P49954	YFR010W-A	YFR010W-A	189 nt		4.29	□□□□□ -1.72
NIT3	P49954	YAL044W-A	YAL044W-A	333 nt		4.29	□□□□□ -1.72
NIT3	P49954	RRG8	YPR116W	834 nt		4.29	□□□□□ -1.72
NIT3	P49954	OM14	YBR230C	405 nt		4.29	□□□□□ -1.72
NIT3	P49954	GMC1	YDR506C	1827 nt		4.29	□□□□□ -1.72
NIT3	P49954	PKP2	YGL059W	1476 nt		4.29	□□□□□ -1.72
NIT3	P49954	TMA64	YDR117C	1698 nt		4.29	□□□□□ -1.72
NIT3	P49954	PAN1	YIR006C	4443 nt		4.28	□□□□□ -1.72
NIT3	P49954	PEX10	YDR265W	1014 nt		4.28	□□□□□ -1.72
NIT3	P49954	YER165C-A	YER165C-A	357 nt		4.28	□□□□□ -1.72
NIT3	P49954	YKL070W	YKL070W	510 nt		4.28	□□□□□ -1.72
NIT3	P49954	BET5	YML077W	480 nt		4.28	□□□□□ -1.72
NIT3	P49954	RPB5	YBR154C	648 nt		4.28	□□□□□ -1.72
NIT3	P49954	CRT10	YOL063C	2874 nt		4.28	□□□□□ -1.72
NIT3	P49954	YOL153C	YOL153C	1746 nt		4.28	□□□□□ -1.72
NIT3	P49954	YBR238C	YBR238C	2196 nt		4.28	□□□□□ -1.72
NIT3	P49954	ULP1	YPL020C	1866 nt		4.28	□□□□□ -1.72
NIT3	P49954	GDS1	YOR355W	1569 nt		4.27	□□□□□ -1.73
NIT3	P49954	UBP6	YFR010W	1500 nt		4.27	□□□□□ -1.73
NIT3	P49954	MNR2	YKL064W	2910 nt		4.27	□□□□□ -1.73
NIT3	P49954	LHP1	YDL051W	828 nt		4.27	□□□□□ -1.73
NIT3	P49954	PPH3	YDR075W	927 nt		4.27	□□□□□ -1.73
NIT3	P49954	YHL034W-A	YHL034W-A	462 nt		4.27	□□□□□ -1.73
NIT3	P49954	SDL1	YIL167W	633 nt		4.27	□□□□□ -1.73
NIT3	P49954	SNX4	YJL036W	1272 nt		4.27	□□□□□ -1.73
NIT3	P49954	NMA1	YLR328W	1206 nt		4.27	□□□□□ -1.73
NIT3	P49954	ATP18	YML081C-A	180 nt		4.27	□□□□□ -1.73
NIT3	P49954	YOR203W	YOR203W	354 nt		4.27	□□□□□ -1.73
NIT3	P49954	ALG6	YOR002W	1635 nt		4.27	□□□□□ -1.73
NIT3	P49954	VID22	YLR373C	2706 nt		4.27	□□□□□ -1.73
NIT3	P49954	ANR2	YKL047W	1551 nt		4.27	□□□□□ -1.73
NIT3	P49954	AFR1	YDR085C	1863 nt		4.26	□□□□□ -1.73
NIT3	P49954	FUS2	YMR232W	2034 nt		4.26	□□□□□ -1.73
NIT3	P49954	YMR102C	YMR102C	2505 nt		4.26	□□□□□ -1.73
NIT3	P49954	NCB2	YDR397C	441 nt		4.26	□□□□□ -1.73
NIT3	P49954	FAR7	YFR008W	666 nt		4.26	□□□□□ -1.73
NIT3	P49954	SAE2	YGL175C	1038 nt		4.26	□□□□□ -1.73
NIT3	P49954	YAL056C-A	YAL056C-A	351 nt		4.26	□□□□□ -1.73
NIT3	P49954	YLL044W	YLL044W	447 nt		4.26	□□□□□ -1.73
NIT3	P49954	YPT7	YML001W	627 nt		4.26	□□□□□ -1.73
NIT3	P49954	YNL046W	YNL046W	519 nt		4.26	□□□□□ -1.73
NIT3	P49954	BUD22	YMR014W	1560 nt		4.26	□□□□□ -1.73
NIT3	P49954	AEP1	YMR064W	1557 nt		4.26	□□□□□ -1.73
NIT3	P49954	HUL5	YGL141W	2733 nt		4.26	□□□□□ -1.73
NIT3	P49954	VPS30	YPL120W	1674 nt		4.26	□□□□□ -1.73
NIT3	P49954	RPA14	YDR156W	414 nt		4.25	□□□□□ -1.73
NIT3	P49954	YGR153W	YGR153W	654 nt		4.25	□□□□□ -1.73
NIT3	P49954	RPL17B	YJL177W	555 nt		4.25	□□□□□ -1.73
NIT3	P49954	PIR1	YKL164C	1026 nt		4.25	□□□□□ -1.73
NIT3	P49954	RPC37	YKR025W	849 nt		4.25	□□□□□ -1.73
NIT3	P49954	CMS1	YLR003C	876 nt		4.25	□□□□□ -1.73
NIT3	P49954	ASI3	YNL008C	2031 nt		4.25	□□□□□ -1.73
NIT3	P49954	NHP6A	YPR052C	282 nt		4.25	□□□□□ -1.73
NIT3	P49954	YCL012C	YCL012C	405 nt		4.25	□□□□□ -1.73
NIT3	P49954	PDR5	YOR153W	4536 nt		4.25	□□□□□ -1.73
NIT3	P49954	ALR2	YFL050C	2577 nt		4.25	□□□□□ -1.73
NIT3	P49954	PUB1	YNL016W	1362 nt		4.25	□□□□□ -1.73
NIT3	P49954	YER077C	YER077C	2067 nt		4.25	□□□□□ -1.73
NIT3	P49954	YOR192C-A	YOR192C-A	1317 nt		4.24	□□□□□ -1.73
NIT3	P49954	YOR343W-A	YOR343W-A	1317 nt		4.24	□□□□□ -1.73
NIT3	P49954	YGR117C	YGR117C	1431 nt		4.24	□□□□□ -1.73
NIT3	P49954	RRP42	YDL111C	798 nt		4.24	□□□□□ -1.73
NIT3	P49954	HLR1	YDR528W	1272 nt		4.24	□□□□□ -1.73
NIT3	P49954	ARO2	YGL148W	1131 nt		4.24	□□□□□ -1.73
NIT3	P49954	YHL046W-A	YHL046W-A	327 nt		4.24	□□□□□ -1.73
NIT3	P49954	RSM25	YIL093C	795 nt		4.24	□□□□□ -1.73

Retrieved 100 of 7,029 protein–RNA pairs in 19.6 ms