Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 SKN7YHR206W 1869 nt3.68□□□□□ -1.82
UPF3P48412 ENP2YGR145W 2124 nt3.68□□□□□ -1.82
UPF3P48412 SPT6YGR116W 4356 nt3.68□□□□□ -1.82
UPF3P48412 BYE1YKL005C 1785 nt3.68□□□□□ -1.82
UPF3P48412 CWH43YCR017C 2862 nt3.67□□□□□ -1.82
UPF3P48412 MCM7YBR202W 2538 nt3.67□□□□□ -1.82
UPF3P48412 PMT6YGR199W 2280 nt3.67□□□□□ -1.82
UPF3P48412 MIG2YGL209W 1149 nt3.67□□□□□ -1.82
UPF3P48412 VMA7YGR020C 357 nt3.67□□□□□ -1.82
UPF3P48412 NNT1YLR285W 786 nt3.67□□□□□ -1.82
UPF3P48412 ECM16YMR128W 3804 nt3.67□□□□□ -1.82
UPF3P48412 YOR366WYOR366W 354 nt3.67□□□□□ -1.82
UPF3P48412 FDH2YPL275W 711 nt3.67□□□□□ -1.82
UPF3P48412 SAD1YFR005C 1347 nt3.67□□□□□ -1.82
UPF3P48412 JEN1YKL217W 1851 nt3.67□□□□□ -1.82
UPF3P48412 RUB1YDR139C 234 nt3.66□□□□□ -1.82
UPF3P48412 HOM2YDR158W 1098 nt3.66□□□□□ -1.82
UPF3P48412 OST5YGL226C-A 261 nt3.66□□□□□ -1.82
UPF3P48412 YJL047C-AYJL047C-A 135 nt3.66□□□□□ -1.82
UPF3P48412 KIN4YOR233W 2403 nt3.66□□□□□ -1.82
UPF3P48412 SWI1YPL016W 3945 nt3.66□□□□□ -1.82
UPF3P48412 ERG5YMR015C 1617 nt3.66□□□□□ -1.82
UPF3P48412 YDL176WYDL176W 2127 nt3.65□□□□□ -1.82
UPF3P48412 SPT14YPL175W 1359 nt3.65□□□□□ -1.82
UPF3P48412 ARF1YDL192W 546 nt3.65□□□□□ -1.83
UPF3P48412 RSM27YGR215W 333 nt3.65□□□□□ -1.83
UPF3P48412 IGO2YHR132W-A 396 nt3.65□□□□□ -1.83
UPF3P48412 THP2YHR167W 786 nt3.65□□□□□ -1.83
UPF3P48412 SRT1YMR101C 1032 nt3.65□□□□□ -1.83
UPF3P48412 OCA2YNL056W 594 nt3.65□□□□□ -1.83
UPF3P48412 YNL184CYNL184C 327 nt3.65□□□□□ -1.83
UPF3P48412 PPT2YPL148C 522 nt3.65□□□□□ -1.83
UPF3P48412 YPR027CYPR027C 834 nt3.65□□□□□ -1.83
UPF3P48412 SCD6YPR129W 1050 nt3.65□□□□□ -1.83
UPF3P48412 YBR201C-AYBR201C-A 204 nt3.65□□□□□ -1.83
UPF3P48412 NOG1YPL093W 1944 nt3.65□□□□□ -1.83
UPF3P48412 BEM4YPL161C 1902 nt3.65□□□□□ -1.83
UPF3P48412 RED1YLR263W 2484 nt3.65□□□□□ -1.83
UPF3P48412 GCN5YGR252W 1320 nt3.65□□□□□ -1.83
UPF3P48412 ARG5,6YER069W 2592 nt3.64□□□□□ -1.83
UPF3P48412 SAG1YJR004C 1953 nt3.64□□□□□ -1.83
UPF3P48412 AI3Q0060 1248 nt3.64□□□□□ -1.83
UPF3P48412 YGL074CYGL074C 327 nt3.64□□□□□ -1.83
UPF3P48412 SUI2YJR007W 915 nt3.64□□□□□ -1.83
UPF3P48412 IME1YJR094C 1083 nt3.64□□□□□ -1.83
UPF3P48412 UBC12YLR306W 567 nt3.64□□□□□ -1.83
UPF3P48412 YLR307C-AYLR307C-A 264 nt3.64□□□□□ -1.83
UPF3P48412 TPM1YNL079C 600 nt3.64□□□□□ -1.83
UPF3P48412 IPP1YBR011C 864 nt3.64□□□□□ -1.83
UPF3P48412 RET3YPL010W 570 nt3.64□□□□□ -1.83
UPF3P48412 YPR053CYPR053C 456 nt3.64□□□□□ -1.83
UPF3P48412 PPQ1YPL179W 1650 nt3.64□□□□□ -1.83
UPF3P48412 NUP159YIL115C 4383 nt3.64□□□□□ -1.83
UPF3P48412 ELM1YKL048C 1923 nt3.64□□□□□ -1.83
UPF3P48412 XRS2YDR369C 2565 nt3.63□□□□□ -1.83
UPF3P48412 APC5YOR249C 2058 nt3.63□□□□□ -1.83
UPF3P48412 FAD1YDL045C 921 nt3.63□□□□□ -1.83
UPF3P48412 MGT1YDL200C 567 nt3.63□□□□□ -1.83
UPF3P48412 CBS2YDR197W 1170 nt3.63□□□□□ -1.83
UPF3P48412 GUK1YDR454C 564 nt3.63□□□□□ -1.83
UPF3P48412 YKL162C-AYKL162C-A 153 nt3.63□□□□□ -1.83
UPF3P48412 BTS1YPL069C 1008 nt3.63□□□□□ -1.83
UPF3P48412 DIM1YPL266W 957 nt3.63□□□□□ -1.83
UPF3P48412 YBR116CYBR116C 528 nt3.63□□□□□ -1.83
UPF3P48412 KAP95YLR347C 2586 nt3.63□□□□□ -1.83
UPF3P48412 RPN2YIL075C 2838 nt3.63□□□□□ -1.83
UPF3P48412 MPS1YDL028C 2295 nt3.63□□□□□ -1.83
UPF3P48412 TCB3YML072C 4638 nt3.63□□□□□ -1.83
UPF3P48412 SYO1YDL063C 1863 nt3.62□□□□□ -1.83
UPF3P48412 MYO3YKL129C 3819 nt3.62□□□□□ -1.83
UPF3P48412 TVP15YDR100W 432 nt3.62□□□□□ -1.83
UPF3P48412 SEC53YFL045C 765 nt3.62□□□□□ -1.83
UPF3P48412 COG7YGL005C 840 nt3.62□□□□□ -1.83
UPF3P48412 RPL1BYGL135W 654 nt3.62□□□□□ -1.83
UPF3P48412 YGR161W-CYGR161W-C 279 nt3.62□□□□□ -1.83
UPF3P48412 COX6YHR051W 447 nt3.62□□□□□ -1.83
UPF3P48412 RPA12YJR063W 378 nt3.62□□□□□ -1.83
UPF3P48412 IDP2YLR174W 1239 nt3.62□□□□□ -1.83
UPF3P48412 HMX1YLR205C 954 nt3.62□□□□□ -1.83
UPF3P48412 YPL135C-AYPL135C-A 174 nt3.62□□□□□ -1.83
UPF3P48412 RPL1AYPL220W 654 nt3.62□□□□□ -1.83
UPF3P48412 DPB3YBR278W 606 nt3.62□□□□□ -1.83
UPF3P48412 HCA4YJL033W 2313 nt3.62□□□□□ -1.83
UPF3P48412 ERG9YHR190W 1335 nt3.62□□□□□ -1.83
UPF3P48412 LOS1YKL205W 3303 nt3.62□□□□□ -1.83
UPF3P48412 NDC80YIL144W 2076 nt3.61□□□□□ -1.83
UPF3P48412 FAS1YKL182W 6156 nt3.61□□□□□ -1.83
UPF3P48412 CWC2YDL209C 1020 nt3.61□□□□□ -1.83
UPF3P48412 SPT3YDR392W 1014 nt3.61□□□□□ -1.83
UPF3P48412 YJL175WYJL175W 513 nt3.61□□□□□ -1.83
UPF3P48412 YPT7YML001W 627 nt3.61□□□□□ -1.83
UPF3P48412 NIS1YNL078W 1224 nt3.61□□□□□ -1.83
UPF3P48412 AAR2YBL074C 1068 nt3.61□□□□□ -1.83
UPF3P48412 YOR238WYOR238W 912 nt3.61□□□□□ -1.83
UPF3P48412 RPL19AYBR084C-A 570 nt3.61□□□□□ -1.83
UPF3P48412 ARO80YDR421W 2853 nt3.61□□□□□ -1.83
UPF3P48412 REG1YDR028C 3045 nt3.6□□□□□ -1.83
UPF3P48412 MAK5YBR142W 2322 nt3.6□□□□□ -1.83
UPF3P48412 MSH2YOL090W 2895 nt3.6□□□□□ -1.83
UPF3P48412 YPD1YDL235C 504 nt3.6□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 24.4 ms