Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GABRA4P48169 AC242852.2-201ENST00000615738 1807 ntBASIC20.26■□□□□ 0.83
GABRA4P48169 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABRA4P48169 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.26■□□□□ 0.83
GABRA4P48169 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GABRA4P48169 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.26■□□□□ 0.83
GABRA4P48169 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.26■□□□□ 0.83
GABRA4P48169 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.26■□□□□ 0.83
GABRA4P48169 MFSD11-216ENST00000590393 1141 ntBASIC20.26■□□□□ 0.83
GABRA4P48169 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.26■□□□□ 0.83
GABRA4P48169 AC011767.1-201ENST00000617410 1153 ntBASIC20.26■□□□□ 0.83
GABRA4P48169 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABRA4P48169 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABRA4P48169 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABRA4P48169 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GABRA4P48169 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABRA4P48169 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABRA4P48169 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABRA4P48169 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GABRA4P48169 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GABRA4P48169 KRT18P20-201ENST00000548986 1279 ntBASIC20.25■□□□□ 0.83
GABRA4P48169 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.25■□□□□ 0.83
GABRA4P48169 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABRA4P48169 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABRA4P48169 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GABRA4P48169 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.25■□□□□ 0.83
GABRA4P48169 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABRA4P48169 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.25■□□□□ 0.83
GABRA4P48169 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABRA4P48169 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
GABRA4P48169 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GABRA4P48169 AC233723.2-201ENST00000623798 2106 ntBASIC20.24■□□□□ 0.83
GABRA4P48169 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABRA4P48169 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.24■□□□□ 0.83
GABRA4P48169 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
GABRA4P48169 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.24■□□□□ 0.83
GABRA4P48169 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GABRA4P48169 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GABRA4P48169 MYCNOS-205ENST00000641950 531 ntBASIC20.24■□□□□ 0.83
GABRA4P48169 GUSBP5-202ENST00000510805 1989 ntBASIC20.24■□□□□ 0.83
GABRA4P48169 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABRA4P48169 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GABRA4P48169 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABRA4P48169 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABRA4P48169 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.24■□□□□ 0.83
GABRA4P48169 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GABRA4P48169 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
GABRA4P48169 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.23■□□□□ 0.83
GABRA4P48169 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GABRA4P48169 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABRA4P48169 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
GABRA4P48169 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.23■□□□□ 0.83
GABRA4P48169 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GABRA4P48169 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GABRA4P48169 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GABRA4P48169 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABRA4P48169 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.23■□□□□ 0.83
GABRA4P48169 FAM99A-202ENST00000538190 1989 ntBASIC20.23■□□□□ 0.83
GABRA4P48169 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
GABRA4P48169 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.22■□□□□ 0.83
GABRA4P48169 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.22■□□□□ 0.83
GABRA4P48169 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
GABRA4P48169 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
GABRA4P48169 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GABRA4P48169 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.22■□□□□ 0.83
GABRA4P48169 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GABRA4P48169 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
GABRA4P48169 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.21■□□□□ 0.83
GABRA4P48169 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GABRA4P48169 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GABRA4P48169 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.21■□□□□ 0.83
GABRA4P48169 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GABRA4P48169 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.21■□□□□ 0.83
GABRA4P48169 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
GABRA4P48169 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.21■□□□□ 0.83
GABRA4P48169 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABRA4P48169 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.2■□□□□ 0.82
GABRA4P48169 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABRA4P48169 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.2■□□□□ 0.82
GABRA4P48169 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GABRA4P48169 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.2■□□□□ 0.82
GABRA4P48169 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.2■□□□□ 0.82
GABRA4P48169 DUX4L16-201ENST00000555130 1264 ntBASIC20.2■□□□□ 0.82
GABRA4P48169 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABRA4P48169 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.2■□□□□ 0.82
GABRA4P48169 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
GABRA4P48169 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.2■□□□□ 0.82
GABRA4P48169 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GABRA4P48169 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms