Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC105265.2-201ENST00000467189 838 ntBASIC20.59■□□□□ 0.89
SLC6A12P48065 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A12P48065 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A12P48065 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A12P48065 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC6A12P48065 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC6A12P48065 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A12P48065 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.58■□□□□ 0.89
SLC6A12P48065 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A12P48065 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A12P48065 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A12P48065 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SLC6A12P48065 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SLC6A12P48065 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC6A12P48065 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC6A12P48065 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC6A12P48065 TPRG1LP1-201ENST00000598702 760 ntBASIC20.58■□□□□ 0.89
SLC6A12P48065 AL358852.1-201ENST00000623174 1268 ntBASIC20.58■□□□□ 0.89
SLC6A12P48065 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
SLC6A12P48065 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A12P48065 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC6A12P48065 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC6A12P48065 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC6A12P48065 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.58■□□□□ 0.88
SLC6A12P48065 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
SLC6A12P48065 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
SLC6A12P48065 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SLC6A12P48065 AL137060.1-201ENST00000618151 2648 ntBASIC20.57■□□□□ 0.88
SLC6A12P48065 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC6A12P48065 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC6A12P48065 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC6A12P48065 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC6A12P48065 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC6A12P48065 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC6A12P48065 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC6A12P48065 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SLC6A12P48065 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A12P48065 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SLC6A12P48065 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A12P48065 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A12P48065 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC6A12P48065 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A12P48065 IRS3P-201ENST00000223076 1006 ntBASIC20.56■□□□□ 0.88
SLC6A12P48065 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A12P48065 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC6A12P48065 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC6A12P48065 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A12P48065 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SLC6A12P48065 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A12P48065 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A12P48065 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC6A12P48065 FEM1AP4-201ENST00000443167 1987 ntBASIC20.55■□□□□ 0.88
SLC6A12P48065 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SLC6A12P48065 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SLC6A12P48065 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SLC6A12P48065 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A12P48065 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC6A12P48065 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A12P48065 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC6A12P48065 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC6A12P48065 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A12P48065 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC6A12P48065 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC6A12P48065 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC6A12P48065 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC6A12P48065 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A12P48065 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC6A12P48065 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A12P48065 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A12P48065 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A12P48065 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.54■□□□□ 0.88
SLC6A12P48065 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A12P48065 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC6A12P48065 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SLC6A12P48065 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A12P48065 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A12P48065 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SLC6A12P48065 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A12P48065 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
SLC6A12P48065 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A12P48065 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A12P48065 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A12P48065 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC6A12P48065 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC6A12P48065 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC6A12P48065 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC6A12P48065 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms