Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.29■□□□□ 0.84
XCR1P46094 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.29■□□□□ 0.84
XCR1P46094 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
XCR1P46094 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.28■□□□□ 0.84
XCR1P46094 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.28■□□□□ 0.84
XCR1P46094 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
XCR1P46094 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.28■□□□□ 0.84
XCR1P46094 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.28■□□□□ 0.84
XCR1P46094 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
XCR1P46094 AL034346.1-201ENST00000568244 1277 ntBASIC20.28■□□□□ 0.84
XCR1P46094 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.28■□□□□ 0.84
XCR1P46094 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.28■□□□□ 0.84
XCR1P46094 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.28■□□□□ 0.84
XCR1P46094 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
XCR1P46094 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 AC005224.4-201ENST00000583262 1652 ntBASIC20.28■□□□□ 0.84
XCR1P46094 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
XCR1P46094 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.28■□□□□ 0.84
XCR1P46094 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.28■□□□□ 0.84
XCR1P46094 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XCR1P46094 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XCR1P46094 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
XCR1P46094 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
XCR1P46094 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XCR1P46094 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XCR1P46094 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.27■□□□□ 0.84
XCR1P46094 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.27■□□□□ 0.84
XCR1P46094 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XCR1P46094 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.27■□□□□ 0.84
XCR1P46094 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XCR1P46094 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XCR1P46094 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XCR1P46094 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XCR1P46094 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
XCR1P46094 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.27■□□□□ 0.84
XCR1P46094 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.27■□□□□ 0.84
XCR1P46094 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XCR1P46094 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
XCR1P46094 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
XCR1P46094 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XCR1P46094 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
XCR1P46094 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.26■□□□□ 0.83
XCR1P46094 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
XCR1P46094 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
XCR1P46094 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XCR1P46094 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
XCR1P46094 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.26■□□□□ 0.83
XCR1P46094 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XCR1P46094 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XCR1P46094 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XCR1P46094 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
XCR1P46094 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.26■□□□□ 0.83
XCR1P46094 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
XCR1P46094 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.26■□□□□ 0.83
XCR1P46094 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.26■□□□□ 0.83
XCR1P46094 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
XCR1P46094 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
XCR1P46094 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.26■□□□□ 0.83
XCR1P46094 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XCR1P46094 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.26■□□□□ 0.83
XCR1P46094 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.25■□□□□ 0.83
XCR1P46094 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XCR1P46094 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.25■□□□□ 0.83
XCR1P46094 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
XCR1P46094 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XCR1P46094 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
XCR1P46094 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
XCR1P46094 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XCR1P46094 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XCR1P46094 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
XCR1P46094 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
XCR1P46094 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.25■□□□□ 0.83
XCR1P46094 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.25■□□□□ 0.83
XCR1P46094 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XCR1P46094 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
XCR1P46094 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.25■□□□□ 0.83
XCR1P46094 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
XCR1P46094 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.24■□□□□ 0.83
XCR1P46094 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XCR1P46094 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XCR1P46094 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
XCR1P46094 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XCR1P46094 AC010542.4-201ENST00000563151 1910 ntBASIC20.24■□□□□ 0.83
XCR1P46094 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
XCR1P46094 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.24■□□□□ 0.83
XCR1P46094 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
XCR1P46094 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.24■□□□□ 0.83
XCR1P46094 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.24■□□□□ 0.83
XCR1P46094 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
XCR1P46094 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms