Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN6P29350 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN6P29350 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN6P29350 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN6P29350 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN6P29350 OXCT2P1-201ENST00000447263 1535 ntBASIC20.19■□□□□ 0.82
PTPN6P29350 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN6P29350 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN6P29350 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN6P29350 BX842568.3-201ENST00000418104 571 ntBASIC20.19■□□□□ 0.82
PTPN6P29350 AC027682.1-201ENST00000562846 899 ntBASIC20.19■□□□□ 0.82
PTPN6P29350 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PTPN6P29350 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN6P29350 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN6P29350 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN6P29350 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN6P29350 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN6P29350 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN6P29350 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN6P29350 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN6P29350 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PTPN6P29350 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPN6P29350 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN6P29350 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PTPN6P29350 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN6P29350 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN6P29350 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPN6P29350 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.18■□□□□ 0.82
PTPN6P29350 AC091305.1-201ENST00000479476 895 ntBASIC20.18■□□□□ 0.82
PTPN6P29350 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.18■□□□□ 0.82
PTPN6P29350 AC008764.7-201ENST00000593779 1081 ntBASIC20.18■□□□□ 0.82
PTPN6P29350 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.18■□□□□ 0.82
PTPN6P29350 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN6P29350 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN6P29350 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN6P29350 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN6P29350 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN6P29350 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN6P29350 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN6P29350 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN6P29350 AC104564.3-201ENST00000582367 638 ntBASIC20.17■□□□□ 0.82
PTPN6P29350 AC233992.3-201ENST00000607491 485 ntBASIC20.17■□□□□ 0.82
PTPN6P29350 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN6P29350 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN6P29350 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PTPN6P29350 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPN6P29350 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPN6P29350 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PTPN6P29350 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN6P29350 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN6P29350 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN6P29350 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN6P29350 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN6P29350 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN6P29350 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.16■□□□□ 0.82
PTPN6P29350 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN6P29350 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PTPN6P29350 RASA4CP-201ENST00000424092 1398 ntBASIC20.16■□□□□ 0.82
PTPN6P29350 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PTPN6P29350 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN6P29350 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
PTPN6P29350 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN6P29350 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN6P29350 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN6P29350 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.15■□□□□ 0.82
PTPN6P29350 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN6P29350 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
PTPN6P29350 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN6P29350 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PTPN6P29350 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN6P29350 AC099791.1-201ENST00000416440 715 ntBASIC20.15■□□□□ 0.82
PTPN6P29350 SLC47A1P1-202ENST00000449666 945 ntBASIC20.15■□□□□ 0.82
PTPN6P29350 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN6P29350 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN6P29350 AC087239.1-201ENST00000622671 572 ntBASIC20.15■□□□□ 0.82
PTPN6P29350 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.15■□□□□ 0.82
PTPN6P29350 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN6P29350 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN6P29350 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PTPN6P29350 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN6P29350 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN6P29350 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
PTPN6P29350 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN6P29350 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PTPN6P29350 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN6P29350 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN6P29350 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN6P29350 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN6P29350 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN6P29350 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN6P29350 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN6P29350 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN6P29350 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PTPN6P29350 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN6P29350 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN6P29350 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN6P29350 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN6P29350 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN6P29350 AC003102.1-202ENST00000563394 1796 ntBASIC20.13■□□□□ 0.81
PTPN6P29350 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms