Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.55■□□□□ 0.72
RPS4Y1P22090 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4Y1P22090 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4Y1P22090 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPS4Y1P22090 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y1P22090 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y1P22090 AC005229.4-201ENST00000610085 2198 ntBASIC19.54■□□□□ 0.72
RPS4Y1P22090 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y1P22090 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RPS4Y1P22090 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y1P22090 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RPS4Y1P22090 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y1P22090 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RPS4Y1P22090 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.54■□□□□ 0.72
RPS4Y1P22090 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y1P22090 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPS4Y1P22090 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.53■□□□□ 0.72
RPS4Y1P22090 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RPS4Y1P22090 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.53■□□□□ 0.72
RPS4Y1P22090 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RPS4Y1P22090 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.53■□□□□ 0.72
RPS4Y1P22090 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RPS4Y1P22090 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.53■□□□□ 0.72
RPS4Y1P22090 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.53■□□□□ 0.72
RPS4Y1P22090 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPS4Y1P22090 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4Y1P22090 AC005224.4-201ENST00000583262 1652 ntBASIC19.52■□□□□ 0.72
RPS4Y1P22090 BX005040.4-201ENST00000637145 1518 ntBASIC19.52■□□□□ 0.72
RPS4Y1P22090 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4Y1P22090 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.52■□□□□ 0.72
RPS4Y1P22090 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4Y1P22090 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.52■□□□□ 0.72
RPS4Y1P22090 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.52■□□□□ 0.72
RPS4Y1P22090 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.52■□□□□ 0.72
RPS4Y1P22090 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.52■□□□□ 0.72
RPS4Y1P22090 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPS4Y1P22090 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.52■□□□□ 0.72
RPS4Y1P22090 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
RPS4Y1P22090 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y1P22090 AL024507.2-201ENST00000606070 2574 ntBASIC19.51■□□□□ 0.71
RPS4Y1P22090 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RPS4Y1P22090 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.51■□□□□ 0.71
RPS4Y1P22090 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y1P22090 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y1P22090 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y1P22090 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y1P22090 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y1P22090 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RPS4Y1P22090 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y1P22090 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y1P22090 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y1P22090 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPS4Y1P22090 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RPS4Y1P22090 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RPS4Y1P22090 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.5■□□□□ 0.71
RPS4Y1P22090 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.5■□□□□ 0.71
RPS4Y1P22090 AC012414.1-201ENST00000556676 535 ntBASIC19.5■□□□□ 0.71
RPS4Y1P22090 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPS4Y1P22090 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.49■□□□□ 0.71
RPS4Y1P22090 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.49■□□□□ 0.71
RPS4Y1P22090 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RPS4Y1P22090 AF106564.1-201ENST00000607058 2553 ntBASIC19.49■□□□□ 0.71
RPS4Y1P22090 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RPS4Y1P22090 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RPS4Y1P22090 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4Y1P22090 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.49■□□□□ 0.71
RPS4Y1P22090 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.49■□□□□ 0.71
RPS4Y1P22090 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4Y1P22090 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4Y1P22090 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.49■□□□□ 0.71
RPS4Y1P22090 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.48■□□□□ 0.71
RPS4Y1P22090 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms