Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF1P18846 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF1P18846 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.64■□□□□ 0.57
ATF1P18846 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF1P18846 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF1P18846 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF1P18846 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF1P18846 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF1P18846 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF1P18846 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.63■□□□□ 0.57
ATF1P18846 AC079089.2-201ENST00000531211 1277 ntBASIC18.63■□□□□ 0.57
ATF1P18846 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF1P18846 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
ATF1P18846 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.63■□□□□ 0.57
ATF1P18846 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF1P18846 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.63■□□□□ 0.57
ATF1P18846 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF1P18846 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF1P18846 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF1P18846 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATF1P18846 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
ATF1P18846 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF1P18846 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATF1P18846 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
ATF1P18846 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ATF1P18846 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 GUSBP5-201ENST00000418136 578 ntBASIC18.62■□□□□ 0.57
ATF1P18846 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF1P18846 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.62■□□□□ 0.57
ATF1P18846 MIR3621-201ENST00000580529 85 ntBASIC18.62■□□□□ 0.57
ATF1P18846 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.62■□□□□ 0.57
ATF1P18846 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.62■□□□□ 0.57
ATF1P18846 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.62■□□□□ 0.57
ATF1P18846 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.62■□□□□ 0.57
ATF1P18846 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATF1P18846 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF1P18846 FEM1AP1-201ENST00000431297 1995 ntBASIC18.61■□□□□ 0.57
ATF1P18846 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
ATF1P18846 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.61■□□□□ 0.57
ATF1P18846 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.61■□□□□ 0.57
ATF1P18846 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF1P18846 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.61■□□□□ 0.57
ATF1P18846 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF1P18846 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.61■□□□□ 0.57
ATF1P18846 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF1P18846 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF1P18846 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF1P18846 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.6■□□□□ 0.57
ATF1P18846 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATF1P18846 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF1P18846 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ATF1P18846 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF1P18846 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF1P18846 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF1P18846 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF1P18846 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF1P18846 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF1P18846 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF1P18846 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.6■□□□□ 0.57
ATF1P18846 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.6■□□□□ 0.57
ATF1P18846 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.6■□□□□ 0.57
ATF1P18846 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.6■□□□□ 0.57
ATF1P18846 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF1P18846 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF1P18846 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATF1P18846 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ATF1P18846 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.59■□□□□ 0.57
ATF1P18846 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.59■□□□□ 0.57
ATF1P18846 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
ATF1P18846 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF1P18846 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATF1P18846 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF1P18846 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATF1P18846 AC104564.3-201ENST00000582367 638 ntBASIC18.59■□□□□ 0.57
ATF1P18846 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.59■□□□□ 0.57
ATF1P18846 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.59■□□□□ 0.57
ATF1P18846 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATF1P18846 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.59■□□□□ 0.57
ATF1P18846 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ATF1P18846 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATF1P18846 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF1P18846 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATF1P18846 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF1P18846 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.58■□□□□ 0.57
ATF1P18846 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF1P18846 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF1P18846 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF1P18846 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATF1P18846 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms