Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SLC25A24-204ENST00000569674 2357 ntBASIC20.7■□□□□ 0.9
CDH1P12830 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH1P12830 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH1P12830 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH1P12830 AC012414.1-201ENST00000556676 535 ntBASIC20.7■□□□□ 0.9
CDH1P12830 AL034346.1-201ENST00000568244 1277 ntBASIC20.7■□□□□ 0.9
CDH1P12830 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH1P12830 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.7■□□□□ 0.9
CDH1P12830 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDH1P12830 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH1P12830 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH1P12830 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH1P12830 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH1P12830 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH1P12830 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH1P12830 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH1P12830 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH1P12830 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH1P12830 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH1P12830 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH1P12830 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH1P12830 ZNRF2P3-201ENST00000424200 374 ntBASIC20.69■□□□□ 0.9
CDH1P12830 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.69■□□□□ 0.9
CDH1P12830 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH1P12830 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.69■□□□□ 0.9
CDH1P12830 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH1P12830 MIR6084-201ENST00000622012 110 ntBASIC20.69■□□□□ 0.9
CDH1P12830 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDH1P12830 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH1P12830 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH1P12830 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH1P12830 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH1P12830 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH1P12830 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH1P12830 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.69■□□□□ 0.9
CDH1P12830 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH1P12830 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CDH1P12830 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH1P12830 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH1P12830 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH1P12830 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH1P12830 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH1P12830 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDH1P12830 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.68■□□□□ 0.9
CDH1P12830 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH1P12830 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.68■□□□□ 0.9
CDH1P12830 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH1P12830 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH1P12830 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH1P12830 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH1P12830 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH1P12830 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CDH1P12830 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH1P12830 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH1P12830 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDH1P12830 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CDH1P12830 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CDH1P12830 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH1P12830 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH1P12830 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH1P12830 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH1P12830 AL354811.1-201ENST00000610286 706 ntBASIC20.67■□□□□ 0.9
CDH1P12830 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH1P12830 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH1P12830 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.67■□□□□ 0.9
CDH1P12830 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH1P12830 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH1P12830 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH1P12830 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH1P12830 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
CDH1P12830 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH1P12830 AC010542.4-201ENST00000563151 1910 ntBASIC20.66■□□□□ 0.9
CDH1P12830 AC026471.6-201ENST00000622954 1905 ntBASIC20.66■□□□□ 0.9
CDH1P12830 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH1P12830 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH1P12830 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDH1P12830 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
CDH1P12830 AL358852.1-201ENST00000623174 1268 ntBASIC20.66■□□□□ 0.9
CDH1P12830 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH1P12830 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH1P12830 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH1P12830 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH1P12830 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH1P12830 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH1P12830 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH1P12830 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDH1P12830 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH1P12830 BX005040.4-201ENST00000637145 1518 ntBASIC20.65■□□□□ 0.9
CDH1P12830 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH1P12830 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH1P12830 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH1P12830 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH1P12830 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDH1P12830 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH1P12830 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH1P12830 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH1P12830 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH1P12830 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDH1P12830 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CDH1P12830 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms