Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 AC073111.5-205ENST00000641717 521 ntBASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 ECEL1P1-201ENST00000373592 1742 ntBASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCNYL3P0C7X3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 HLA-L-209ENST00000420110 1011 ntBASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 CDCA4P2-201ENST00000441182 718 ntBASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCNYL3P0C7X3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 AC005224.4-201ENST00000583262 1652 ntBASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CCNYL3P0C7X3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCNYL3P0C7X3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 AC242852.2-201ENST00000615738 1807 ntBASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCNYL3P0C7X3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 AC011767.1-201ENST00000617410 1153 ntBASIC20.41■□□□□ 0.86
CCNYL3P0C7X3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms