Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.56■■□□□ 1.04
SRPRAP08240 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.56■■□□□ 1.04
SRPRAP08240 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRPRAP08240 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SRPRAP08240 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.56■■□□□ 1.04
SRPRAP08240 DUX4L16-201ENST00000555130 1264 ntBASIC21.56■■□□□ 1.04
SRPRAP08240 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SRPRAP08240 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.56■■□□□ 1.04
SRPRAP08240 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRPRAP08240 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRPRAP08240 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.56■■□□□ 1.04
SRPRAP08240 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SRPRAP08240 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRPRAP08240 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRPRAP08240 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRPRAP08240 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRPRAP08240 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRPRAP08240 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.55■■□□□ 1.04
SRPRAP08240 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.55■■□□□ 1.04
SRPRAP08240 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.55■■□□□ 1.04
SRPRAP08240 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.55■■□□□ 1.04
SRPRAP08240 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SRPRAP08240 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRPRAP08240 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.55■■□□□ 1.04
SRPRAP08240 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.55■■□□□ 1.04
SRPRAP08240 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SRPRAP08240 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SRPRAP08240 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.55■■□□□ 1.04
SRPRAP08240 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRPRAP08240 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SRPRAP08240 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRPRAP08240 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SRPRAP08240 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SRPRAP08240 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.54■■□□□ 1.04
SRPRAP08240 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
SRPRAP08240 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRPRAP08240 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRPRAP08240 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRPRAP08240 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.54■■□□□ 1.04
SRPRAP08240 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SRPRAP08240 CROCCP5-201ENST00000436658 830 ntBASIC21.54■■□□□ 1.04
SRPRAP08240 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.54■■□□□ 1.04
SRPRAP08240 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.54■■□□□ 1.04
SRPRAP08240 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.54■■□□□ 1.04
SRPRAP08240 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
SRPRAP08240 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SRPRAP08240 AC008175.2-201ENST00000612840 297 ntBASIC21.54■■□□□ 1.04
SRPRAP08240 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SRPRAP08240 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRPRAP08240 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRPRAP08240 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.53■■□□□ 1.04
SRPRAP08240 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.53■■□□□ 1.04
SRPRAP08240 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRPRAP08240 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRPRAP08240 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.53■■□□□ 1.04
SRPRAP08240 AC006970.2-201ENST00000450065 779 ntBASIC21.53■■□□□ 1.04
SRPRAP08240 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRPRAP08240 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SRPRAP08240 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.53■■□□□ 1.04
SRPRAP08240 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.53■■□□□ 1.04
SRPRAP08240 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRPRAP08240 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.52■■□□□ 1.04
SRPRAP08240 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SRPRAP08240 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SRPRAP08240 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.52■■□□□ 1.04
SRPRAP08240 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SRPRAP08240 POU5F1P4-201ENST00000413175 1085 ntBASIC21.52■■□□□ 1.04
SRPRAP08240 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.52■■□□□ 1.04
SRPRAP08240 AC120498.10-201ENST00000621827 505 ntBASIC21.52■■□□□ 1.04
SRPRAP08240 AC133561.1-201ENST00000568600 2415 ntBASIC21.52■■□□□ 1.04
SRPRAP08240 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRPRAP08240 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
SRPRAP08240 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.52■■□□□ 1.03
SRPRAP08240 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.52■■□□□ 1.03
SRPRAP08240 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
SRPRAP08240 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
SRPRAP08240 AC003102.1-202ENST00000563394 1796 ntBASIC21.51■■□□□ 1.03
SRPRAP08240 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRPRAP08240 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
SRPRAP08240 AC007322.1-201ENST00000426983 750 ntBASIC21.51■■□□□ 1.03
SRPRAP08240 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.51■■□□□ 1.03
SRPRAP08240 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.51■■□□□ 1.03
SRPRAP08240 AC010536.3-201ENST00000620306 533 ntBASIC21.51■■□□□ 1.03
SRPRAP08240 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
SRPRAP08240 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SRPRAP08240 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRPRAP08240 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRPRAP08240 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.51■■□□□ 1.03
SRPRAP08240 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms