Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.79■■□□□ 1.08
MT-CO1P00395 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.79■■□□□ 1.08
MT-CO1P00395 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.79■■□□□ 1.08
MT-CO1P00395 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.79■■□□□ 1.08
MT-CO1P00395 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MT-CO1P00395 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
MT-CO1P00395 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.79■■□□□ 1.08
MT-CO1P00395 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.79■■□□□ 1.08
MT-CO1P00395 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-CO1P00395 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-CO1P00395 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-CO1P00395 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.78■■□□□ 1.08
MT-CO1P00395 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.78■■□□□ 1.08
MT-CO1P00395 AP006587.3-201ENST00000525742 1516 ntBASIC21.78■■□□□ 1.08
MT-CO1P00395 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-CO1P00395 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.78■■□□□ 1.08
MT-CO1P00395 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-CO1P00395 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-CO1P00395 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-CO1P00395 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-CO1P00395 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
MT-CO1P00395 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.77■■□□□ 1.08
MT-CO1P00395 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.77■■□□□ 1.08
MT-CO1P00395 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-CO1P00395 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-CO1P00395 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
MT-CO1P00395 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
MT-CO1P00395 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
MT-CO1P00395 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO1P00395 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO1P00395 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MT-CO1P00395 AC092053.2-201ENST00000640557 1818 ntBASIC21.76■■□□□ 1.07
MT-CO1P00395 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO1P00395 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO1P00395 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO1P00395 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO1P00395 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO1P00395 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.76■■□□□ 1.07
MT-CO1P00395 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.76■■□□□ 1.07
MT-CO1P00395 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
MT-CO1P00395 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.76■■□□□ 1.07
MT-CO1P00395 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.76■■□□□ 1.07
MT-CO1P00395 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.76■■□□□ 1.07
MT-CO1P00395 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
MT-CO1P00395 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
MT-CO1P00395 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO1P00395 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO1P00395 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO1P00395 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MT-CO1P00395 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.75■■□□□ 1.07
MT-CO1P00395 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.75■■□□□ 1.07
MT-CO1P00395 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.75■■□□□ 1.07
MT-CO1P00395 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.75■■□□□ 1.07
MT-CO1P00395 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.75■■□□□ 1.07
MT-CO1P00395 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.75■■□□□ 1.07
MT-CO1P00395 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.75■■□□□ 1.07
MT-CO1P00395 KRT87P-202ENST00000534226 1464 ntBASIC21.75■■□□□ 1.07
MT-CO1P00395 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO1P00395 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO1P00395 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO1P00395 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO1P00395 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.75■■□□□ 1.07
MT-CO1P00395 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO1P00395 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO1P00395 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.74■■□□□ 1.07
MT-CO1P00395 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.74■■□□□ 1.07
MT-CO1P00395 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.74■■□□□ 1.07
MT-CO1P00395 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.74■■□□□ 1.07
MT-CO1P00395 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.74■■□□□ 1.07
MT-CO1P00395 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.74■■□□□ 1.07
MT-CO1P00395 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO1P00395 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-CO1P00395 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
MT-CO1P00395 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-CO1P00395 AC026471.6-201ENST00000622954 1905 ntBASIC21.73■■□□□ 1.07
MT-CO1P00395 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-CO1P00395 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-CO1P00395 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.73■■□□□ 1.07
MT-CO1P00395 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.73■■□□□ 1.07
MT-CO1P00395 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.73■■□□□ 1.07
MT-CO1P00395 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.73■■□□□ 1.07
MT-CO1P00395 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.73■■□□□ 1.07
MT-CO1P00395 AL137784.2-201ENST00000607332 1000 ntBASIC21.73■■□□□ 1.07
MT-CO1P00395 AC104187.1-201ENST00000607510 612 ntBASIC21.73■■□□□ 1.07
MT-CO1P00395 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MT-CO1P00395 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MT-CO1P00395 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.72■■□□□ 1.07
MT-CO1P00395 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MT-CO1P00395 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms