Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ALDH1A1P00352 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.6■■□□□ 1.53
ALDH1A1P00352 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
ALDH1A1P00352 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ALDH1A1P00352 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
ALDH1A1P00352 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.59■■□□□ 1.53
ALDH1A1P00352 AC008403.3-201ENST00000598924 454 ntBASIC24.59■■□□□ 1.53
ALDH1A1P00352 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.59■■□□□ 1.53
ALDH1A1P00352 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
ALDH1A1P00352 RBM17P2-201ENST00000616397 1405 ntBASIC24.59■■□□□ 1.53
ALDH1A1P00352 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ALDH1A1P00352 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
ALDH1A1P00352 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC24.59■■□□□ 1.53
ALDH1A1P00352 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
ALDH1A1P00352 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.58■■□□□ 1.53
ALDH1A1P00352 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.58■■□□□ 1.53
ALDH1A1P00352 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.58■■□□□ 1.53
ALDH1A1P00352 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC24.58■■□□□ 1.53
ALDH1A1P00352 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ALDH1A1P00352 AC060766.5-201ENST00000590539 871 ntBASIC24.58■■□□□ 1.53
ALDH1A1P00352 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.58■■□□□ 1.53
ALDH1A1P00352 AC243732.1-201ENST00000612648 864 ntBASIC24.58■■□□□ 1.53
ALDH1A1P00352 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC24.58■■□□□ 1.53
ALDH1A1P00352 KRT16P2-201ENST00000414673 1423 ntBASIC24.58■■□□□ 1.53
ALDH1A1P00352 OR7E47P-201ENST00000546390 1422 ntBASIC24.58■■□□□ 1.53
ALDH1A1P00352 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
ALDH1A1P00352 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ALDH1A1P00352 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.57■■□□□ 1.52
ALDH1A1P00352 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
ALDH1A1P00352 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.57■■□□□ 1.52
ALDH1A1P00352 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.57■■□□□ 1.52
ALDH1A1P00352 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ALDH1A1P00352 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ALDH1A1P00352 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
ALDH1A1P00352 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
ALDH1A1P00352 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.57■■□□□ 1.52
ALDH1A1P00352 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC24.57■■□□□ 1.52
ALDH1A1P00352 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC24.57■■□□□ 1.52
ALDH1A1P00352 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.57■■□□□ 1.52
ALDH1A1P00352 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.57■■□□□ 1.52
ALDH1A1P00352 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ALDH1A1P00352 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.57■■□□□ 1.52
ALDH1A1P00352 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ALDH1A1P00352 AP006587.3-201ENST00000525742 1516 ntBASIC24.56■■□□□ 1.52
ALDH1A1P00352 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ALDH1A1P00352 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.56■■□□□ 1.52
ALDH1A1P00352 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
ALDH1A1P00352 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ALDH1A1P00352 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC24.56■■□□□ 1.52
ALDH1A1P00352 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.56■■□□□ 1.52
ALDH1A1P00352 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.56■■□□□ 1.52
ALDH1A1P00352 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC24.56■■□□□ 1.52
ALDH1A1P00352 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC24.56■■□□□ 1.52
ALDH1A1P00352 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
ALDH1A1P00352 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
ALDH1A1P00352 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ALDH1A1P00352 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
ALDH1A1P00352 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ALDH1A1P00352 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
ALDH1A1P00352 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ALDH1A1P00352 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ALDH1A1P00352 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
ALDH1A1P00352 C1QBPP2-201ENST00000528754 825 ntBASIC24.55■■□□□ 1.52
ALDH1A1P00352 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC24.55■■□□□ 1.52
ALDH1A1P00352 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC24.55■■□□□ 1.52
ALDH1A1P00352 CYP2T3P-201ENST00000601990 817 ntBASIC24.55■■□□□ 1.52
ALDH1A1P00352 HLA-B-256ENST00000639848 1089 ntBASIC24.55■■□□□ 1.52
ALDH1A1P00352 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
ALDH1A1P00352 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC24.55■■□□□ 1.52
ALDH1A1P00352 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
ALDH1A1P00352 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ALDH1A1P00352 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.54■■□□□ 1.52
ALDH1A1P00352 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
ALDH1A1P00352 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ALDH1A1P00352 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ALDH1A1P00352 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ALDH1A1P00352 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
ALDH1A1P00352 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
ALDH1A1P00352 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ALDH1A1P00352 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ALDH1A1P00352 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ALDH1A1P00352 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.54■■□□□ 1.52
ALDH1A1P00352 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ALDH1A1P00352 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC24.54■■□□□ 1.52
ALDH1A1P00352 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.54■■□□□ 1.52
ALDH1A1P00352 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.54■■□□□ 1.52
ALDH1A1P00352 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ALDH1A1P00352 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ALDH1A1P00352 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.54■■□□□ 1.52
ALDH1A1P00352 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.54■■□□□ 1.52
ALDH1A1P00352 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
ALDH1A1P00352 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ALDH1A1P00352 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ALDH1A1P00352 KRT17P3-201ENST00000420566 1262 ntBASIC24.53■■□□□ 1.52
ALDH1A1P00352 NME6-213ENST00000451657 871 ntTSL 2 BASIC24.53■■□□□ 1.52
ALDH1A1P00352 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ALDH1A1P00352 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC24.53■■□□□ 1.52
ALDH1A1P00352 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC24.53■■□□□ 1.52
ALDH1A1P00352 Z99916.2-201ENST00000604037 246 ntBASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms