Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.79■□□□□ 0.44
SIX6O95475 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SIX6O95475 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX6O95475 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX6O95475 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX6O95475 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX6O95475 GABARAPL3-202ENST00000624044 1851 ntBASIC17.78■□□□□ 0.44
SIX6O95475 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX6O95475 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.78■□□□□ 0.44
SIX6O95475 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.78■□□□□ 0.44
SIX6O95475 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX6O95475 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX6O95475 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX6O95475 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SIX6O95475 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.78■□□□□ 0.44
SIX6O95475 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SIX6O95475 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.77■□□□□ 0.44
SIX6O95475 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
SIX6O95475 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.77■□□□□ 0.44
SIX6O95475 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SIX6O95475 AC073314.1-201ENST00000568729 2216 ntBASIC17.77■□□□□ 0.44
SIX6O95475 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX6O95475 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SIX6O95475 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX6O95475 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX6O95475 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.77■□□□□ 0.43
SIX6O95475 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX6O95475 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
SIX6O95475 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX6O95475 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIX6O95475 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SIX6O95475 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX6O95475 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.76■□□□□ 0.43
SIX6O95475 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 LONRF2P2-201ENST00000439212 571 ntBASIC17.76■□□□□ 0.43
SIX6O95475 AC004448.1-201ENST00000458332 883 ntBASIC17.76■□□□□ 0.43
SIX6O95475 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIX6O95475 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SIX6O95475 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX6O95475 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX6O95475 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX6O95475 AP005212.1-201ENST00000581547 1997 ntBASIC17.75■□□□□ 0.43
SIX6O95475 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX6O95475 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.75■□□□□ 0.43
SIX6O95475 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
SIX6O95475 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX6O95475 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX6O95475 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX6O95475 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX6O95475 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIX6O95475 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SIX6O95475 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX6O95475 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX6O95475 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIX6O95475 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SIX6O95475 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SIX6O95475 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.75■□□□□ 0.43
SIX6O95475 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX6O95475 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX6O95475 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.74■□□□□ 0.43
SIX6O95475 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX6O95475 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX6O95475 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SIX6O95475 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIX6O95475 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.74■□□□□ 0.43
SIX6O95475 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.74■□□□□ 0.43
SIX6O95475 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SIX6O95475 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.74■□□□□ 0.43
SIX6O95475 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SIX6O95475 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX6O95475 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SIX6O95475 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.74■□□□□ 0.43
SIX6O95475 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIX6O95475 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.73■□□□□ 0.43
SIX6O95475 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX6O95475 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.73■□□□□ 0.43
SIX6O95475 OXCT2P1-201ENST00000447263 1535 ntBASIC17.73■□□□□ 0.43
SIX6O95475 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX6O95475 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIX6O95475 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX6O95475 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.73■□□□□ 0.43
SIX6O95475 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.73■□□□□ 0.43
SIX6O95475 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIX6O95475 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SIX6O95475 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SIX6O95475 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms