Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALX3O95076 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALX3O95076 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ALX3O95076 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALX3O95076 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.71■□□□□ 0.59
ALX3O95076 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.71■□□□□ 0.59
ALX3O95076 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALX3O95076 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALX3O95076 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.71■□□□□ 0.59
ALX3O95076 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ALX3O95076 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.71■□□□□ 0.59
ALX3O95076 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALX3O95076 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALX3O95076 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALX3O95076 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.71■□□□□ 0.59
ALX3O95076 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
ALX3O95076 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ALX3O95076 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.7■□□□□ 0.58
ALX3O95076 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALX3O95076 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX3O95076 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALX3O95076 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX3O95076 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ALX3O95076 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.7■□□□□ 0.58
ALX3O95076 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ALX3O95076 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX3O95076 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALX3O95076 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALX3O95076 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.7■□□□□ 0.58
ALX3O95076 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX3O95076 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX3O95076 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALX3O95076 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALX3O95076 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.69■□□□□ 0.58
ALX3O95076 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.69■□□□□ 0.58
ALX3O95076 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALX3O95076 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALX3O95076 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.69■□□□□ 0.58
ALX3O95076 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ALX3O95076 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.69■□□□□ 0.58
ALX3O95076 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.69■□□□□ 0.58
ALX3O95076 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ALX3O95076 AC010542.4-201ENST00000563151 1910 ntBASIC18.69■□□□□ 0.58
ALX3O95076 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.69■□□□□ 0.58
ALX3O95076 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALX3O95076 TSPY9P-201ENST00000440215 945 ntBASIC18.69■□□□□ 0.58
ALX3O95076 TSPY11P-201ENST00000442607 1045 ntBASIC18.69■□□□□ 0.58
ALX3O95076 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.69■□□□□ 0.58
ALX3O95076 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.69■□□□□ 0.58
ALX3O95076 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.69■□□□□ 0.58
ALX3O95076 AL031602.1-201ENST00000633169 911 ntBASIC18.69■□□□□ 0.58
ALX3O95076 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALX3O95076 LETM1P2-201ENST00000597330 2178 ntBASIC18.69■□□□□ 0.58
ALX3O95076 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
ALX3O95076 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ALX3O95076 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
ALX3O95076 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX3O95076 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX3O95076 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALX3O95076 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX3O95076 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
ALX3O95076 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX3O95076 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX3O95076 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ALX3O95076 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX3O95076 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX3O95076 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.68■□□□□ 0.58
ALX3O95076 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALX3O95076 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.68■□□□□ 0.58
ALX3O95076 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX3O95076 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.67■□□□□ 0.58
ALX3O95076 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.67■□□□□ 0.58
ALX3O95076 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX3O95076 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX3O95076 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ALX3O95076 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX3O95076 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ALX3O95076 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALX3O95076 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX3O95076 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX3O95076 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.67■□□□□ 0.58
ALX3O95076 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ALX3O95076 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.67■□□□□ 0.58
ALX3O95076 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ALX3O95076 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
ALX3O95076 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALX3O95076 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.66■□□□□ 0.58
ALX3O95076 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ALX3O95076 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALX3O95076 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALX3O95076 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALX3O95076 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.66■□□□□ 0.58
ALX3O95076 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.66■□□□□ 0.58
ALX3O95076 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALX3O95076 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.66■□□□□ 0.58
ALX3O95076 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.66■□□□□ 0.58
ALX3O95076 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.66■□□□□ 0.58
ALX3O95076 UNC93B8-201ENST00000511903 705 ntBASIC18.66■□□□□ 0.58
ALX3O95076 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.66■□□□□ 0.58
ALX3O95076 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms